Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MIR1289-2-201ENST00000408360 111 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH11P55287 U8.20-201ENST00000459445 131 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AC055731.1-201ENST00000474387 401 ntBASIC1.83□□□□□ -2.12
CDH11P55287 Y_RNA.721-201ENST00000517207 102 ntBASIC1.83□□□□□ -2.12
CDH11P55287 RNU2-19P-201ENST00000517288 84 ntBASIC1.83□□□□□ -2.12
CDH11P55287 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.83□□□□□ -2.12
CDH11P55287 AC113195.1-201ENST00000579952 141 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AC078899.2-201ENST00000595282 212 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AL390123.1-201ENST00000603216 237 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AC124312.5-201ENST00000604451 268 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AL353149.1-201ENST00000610667 244 ntBASIC1.83□□□□□ -2.12
CDH11P55287 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AC007742.2-201ENST00000618226 398 ntBASIC1.83□□□□□ -2.12
CDH11P55287 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDH11P55287 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH11P55287 SNORA63-201ENST00000363450 132 ntBASIC1.82□□□□□ -2.12
CDH11P55287 Y_RNA.153-201ENST00000363615 91 ntBASIC1.82□□□□□ -2.12
CDH11P55287 SNORA63.7-201ENST00000365579 123 ntBASIC1.82□□□□□ -2.12
CDH11P55287 Y_RNA.424-201ENST00000384063 103 ntBASIC1.82□□□□□ -2.12
CDH11P55287 RNU6-639P-201ENST00000384074 107 ntBASIC1.82□□□□□ -2.12
CDH11P55287 RNU6-20P-201ENST00000384106 107 ntBASIC1.82□□□□□ -2.12
CDH11P55287 Y_RNA.455-201ENST00000384230 98 ntBASIC1.82□□□□□ -2.12
CDH11P55287 RNU6-1160P-201ENST00000384546 104 ntBASIC1.82□□□□□ -2.12
CDH11P55287 RNA5SP465-201ENST00000391195 109 ntBASIC1.82□□□□□ -2.12
CDH11P55287 AL023284.1-201ENST00000403956 276 ntBASIC1.82□□□□□ -2.12
CDH11P55287 RNA5SP450-201ENST00000411206 102 ntBASIC1.82□□□□□ -2.12
CDH11P55287 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.82□□□□□ -2.12
CDH11P55287 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH11P55287 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH11P55287 AC074290.1-201ENST00000448883 135 ntBASIC1.82□□□□□ -2.12
CDH11P55287 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH11P55287 SCARNA15.1-201ENST00000516384 125 ntBASIC1.82□□□□□ -2.12
CDH11P55287 RNU6-966P-201ENST00000516479 104 ntBASIC1.82□□□□□ -2.12
CDH11P55287 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.82□□□□□ -2.12
CDH11P55287 MIR4524B-201ENST00000581569 115 ntBASIC1.82□□□□□ -2.12
CDH11P55287 RAC1P9-201ENST00000604990 392 ntBASIC1.82□□□□□ -2.12
CDH11P55287 AC005828.6-201ENST00000606610 232 ntBASIC1.82□□□□□ -2.12
CDH11P55287 MIR3674-201ENST00000636576 68 ntBASIC1.82□□□□□ -2.12
CDH11P55287 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDH11P55287 AL159152.1-201ENST00000635019 2587 ntBASIC1.81□□□□□ -2.12
CDH11P55287 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH11P55287 Y_RNA.101-201ENST00000363154 102 ntBASIC1.81□□□□□ -2.12
CDH11P55287 RNU6-626P-201ENST00000363354 107 ntBASIC1.81□□□□□ -2.12
CDH11P55287 Y_RNA.361-201ENST00000365515 120 ntBASIC1.81□□□□□ -2.12
CDH11P55287 Y_RNA.380-201ENST00000365663 111 ntBASIC1.81□□□□□ -2.12
CDH11P55287 Y_RNA.389-201ENST00000383924 113 ntBASIC1.81□□□□□ -2.12
CDH11P55287 Y_RNA.422-201ENST00000384054 114 ntBASIC1.81□□□□□ -2.12
CDH11P55287 Y_RNA.471-201ENST00000384312 102 ntBASIC1.81□□□□□ -2.12
CDH11P55287 MIR597-201ENST00000384968 97 ntBASIC1.81□□□□□ -2.12
CDH11P55287 AL590004.1-201ENST00000405321 300 ntBASIC1.81□□□□□ -2.12
CDH11P55287 RNU6-1199P-201ENST00000411249 104 ntBASIC1.81□□□□□ -2.12
CDH11P55287 AC113618.1-201ENST00000416747 285 ntBASIC1.81□□□□□ -2.12
CDH11P55287 AC099677.2-201ENST00000436385 175 ntBASIC1.81□□□□□ -2.12
CDH11P55287 AC011406.1-201ENST00000512440 370 ntBASIC1.81□□□□□ -2.12
CDH11P55287 RNU2-12P-201ENST00000517216 168 ntBASIC1.81□□□□□ -2.12
CDH11P55287 SUMO2P18-201ENST00000518873 252 ntBASIC1.81□□□□□ -2.12
CDH11P55287 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH11P55287 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
CDH11P55287 AL353621.2-201ENST00000605340 133 ntBASIC1.81□□□□□ -2.12
CDH11P55287 AC004467.1-201ENST00000615678 330 ntBASIC1.81□□□□□ -2.12
CDH11P55287 AC130454.1-201ENST00000622948 401 ntBASIC1.81□□□□□ -2.12
CDH11P55287 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDH11P55287 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CDH11P55287 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDH11P55287 RNU6-23P-201ENST00000363283 107 ntBASIC1.8□□□□□ -2.12
CDH11P55287 Y_RNA.230-201ENST00000364348 109 ntBASIC1.8□□□□□ -2.12
CDH11P55287 RNU6-738P-201ENST00000384531 106 ntBASIC1.8□□□□□ -2.12
CDH11P55287 Y_RNA.570-201ENST00000384750 101 ntBASIC1.8□□□□□ -2.12
CDH11P55287 RNU11-3P-201ENST00000391111 133 ntBASIC1.8□□□□□ -2.12
CDH11P55287 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
CDH11P55287 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
CDH11P55287 RNU6-101P-201ENST00000410323 104 ntBASIC1.8□□□□□ -2.12
CDH11P55287 AC005002.2-201ENST00000438228 269 ntBASIC1.8□□□□□ -2.12
CDH11P55287 MTND2P29-201ENST00000438595 412 ntBASIC1.8□□□□□ -2.12
CDH11P55287 AC073910.1-201ENST00000445047 438 ntBASIC1.8□□□□□ -2.12
CDH11P55287 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.8□□□□□ -2.12
CDH11P55287 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
CDH11P55287 RNU6-764P-201ENST00000516396 105 ntBASIC1.8□□□□□ -2.12
CDH11P55287 RNU6-107P-201ENST00000516643 102 ntBASIC1.8□□□□□ -2.12
CDH11P55287 AC136932.1-201ENST00000574771 208 ntBASIC1.8□□□□□ -2.12
CDH11P55287 MIR4529-201ENST00000578110 78 ntBASIC1.8□□□□□ -2.12
CDH11P55287 Y_RNA.772-201ENST00000606692 102 ntBASIC1.8□□□□□ -2.12
CDH11P55287 AC091932.3-201ENST00000624223 323 ntBASIC1.8□□□□□ -2.12
CDH11P55287 MIR338-201ENST00000636369 67 ntBASIC1.8□□□□□ -2.12
CDH11P55287 Y_RNA.243-201ENST00000364481 109 ntBASIC1.79□□□□□ -2.12
CDH11P55287 Y_RNA.287-201ENST00000364853 94 ntBASIC1.79□□□□□ -2.12
CDH11P55287 RNU6-1310P-201ENST00000384153 107 ntBASIC1.79□□□□□ -2.12
CDH11P55287 SNORD63-201ENST00000384262 68 ntBASIC1.79□□□□□ -2.12
CDH11P55287 Y_RNA.462-201ENST00000384268 102 ntBASIC1.79□□□□□ -2.12
CDH11P55287 MIR606-201ENST00000384851 96 ntBASIC1.79□□□□□ -2.12
CDH11P55287 AL355796.1-201ENST00000406706 323 ntBASIC1.79□□□□□ -2.12
CDH11P55287 RNA5SP475-201ENST00000410568 110 ntBASIC1.79□□□□□ -2.12
CDH11P55287 AL139156.1-201ENST00000412785 841 ntBASIC1.79□□□□□ -2.12
CDH11P55287 AC096920.1-201ENST00000423991 241 ntBASIC1.79□□□□□ -2.12
CDH11P55287 HMGN2P34-201ENST00000437647 269 ntBASIC1.79□□□□□ -2.12
CDH11P55287 SNORD65B-201ENST00000459126 73 ntBASIC1.79□□□□□ -2.12
CDH11P55287 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
CDH11P55287 AC010655.3-201ENST00000478818 450 ntBASIC1.79□□□□□ -2.12
CDH11P55287 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms