Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU2-16P-201ENST00000410712 136 ntBASIC0.84□□□□□ -2.27
CDH6P55285 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.84□□□□□ -2.27
CDH6P55285 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
CDH6P55285 MRPS10P1-201ENST00000448483 130 ntBASIC0.84□□□□□ -2.27
CDH6P55285 SNORD65B-201ENST00000459126 73 ntBASIC0.84□□□□□ -2.27
CDH6P55285 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
CDH6P55285 RNU6-107P-201ENST00000516643 102 ntBASIC0.84□□□□□ -2.27
CDH6P55285 AC091144.1-201ENST00000519573 138 ntBASIC0.84□□□□□ -2.27
CDH6P55285 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.84□□□□□ -2.27
CDH6P55285 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
CDH6P55285 MIR8070-201ENST00000616510 88 ntBASIC0.84□□□□□ -2.27
CDH6P55285 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
CDH6P55285 RNU5F-3P-201ENST00000363767 117 ntBASIC0.83□□□□□ -2.28
CDH6P55285 RNY3P3-201ENST00000363816 102 ntBASIC0.83□□□□□ -2.28
CDH6P55285 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
CDH6P55285 Y_RNA.533-201ENST00000384596 114 ntBASIC0.83□□□□□ -2.28
CDH6P55285 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
CDH6P55285 AC010469.2-201ENST00000496412 480 ntBASIC0.83□□□□□ -2.28
CDH6P55285 AC093303.1-201ENST00000514549 295 ntBASIC0.83□□□□□ -2.28
CDH6P55285 RNA5SP168-201ENST00000516642 112 ntBASIC0.83□□□□□ -2.28
CDH6P55285 RNU6-273P-201ENST00000516937 96 ntBASIC0.83□□□□□ -2.28
CDH6P55285 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.83□□□□□ -2.28
CDH6P55285 AC134698.4-201ENST00000523451 826 ntBASIC0.83□□□□□ -2.28
CDH6P55285 7SK.7-201ENST00000603504 247 ntBASIC0.83□□□□□ -2.28
CDH6P55285 Y_RNA.414-201ENST00000384011 101 ntBASIC0.82□□□□□ -2.28
CDH6P55285 MIR10B-201ENST00000385011 110 ntBASIC0.82□□□□□ -2.28
CDH6P55285 ZNF885P-201ENST00000420174 1098 ntBASIC0.82□□□□□ -2.28
CDH6P55285 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.82□□□□□ -2.28
CDH6P55285 AC243428.1-201ENST00000421099 264 ntBASIC0.82□□□□□ -2.28
CDH6P55285 AC098826.2-201ENST00000452011 651 ntBASIC0.82□□□□□ -2.28
CDH6P55285 RNU6-322P-201ENST00000516010 103 ntBASIC0.82□□□□□ -2.28
CDH6P55285 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
CDH6P55285 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.82□□□□□ -2.28
CDH6P55285 AC090049.2-201ENST00000550377 109 ntBASIC0.82□□□□□ -2.28
CDH6P55285 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.82□□□□□ -2.28
CDH6P55285 NBR2-204ENST00000587322 63 ntBASIC0.82□□□□□ -2.28
CDH6P55285 AC080078.2-201ENST00000603766 501 ntBASIC0.82□□□□□ -2.28
CDH6P55285 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
CDH6P55285 AC006435.5-201ENST00000624486 112 ntBASIC0.82□□□□□ -2.28
CDH6P55285 RNU6-1090P-201ENST00000364065 94 ntBASIC0.81□□□□□ -2.28
CDH6P55285 SNORD41-201ENST00000386967 70 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AL451046.2-201ENST00000403074 277 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AL355796.1-201ENST00000406706 323 ntBASIC0.81□□□□□ -2.28
CDH6P55285 CALM2P4-201ENST00000430810 426 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AC002429.1-201ENST00000437672 148 ntBASIC0.81□□□□□ -2.28
CDH6P55285 MTND1P1-201ENST00000445453 368 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.81□□□□□ -2.28
CDH6P55285 RNU7-175P-201ENST00000515915 61 ntBASIC0.81□□□□□ -2.28
CDH6P55285 SNORD79.1-201ENST00000516069 84 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.81□□□□□ -2.28
CDH6P55285 MIR5696-201ENST00000578474 85 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.81□□□□□ -2.28
CDH6P55285 AC136443.5-201ENST00000603741 370 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AL357312.1-201ENST00000603879 298 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AC010999.1-201ENST00000611856 324 ntBASIC0.81□□□□□ -2.28
CDH6P55285 MIR6079-201ENST00000635807 62 ntBASIC0.81□□□□□ -2.28
CDH6P55285 AC068137.4-201ENST00000638485 296 ntBASIC0.81□□□□□ -2.28
CDH6P55285 RNU6-222P-201ENST00000362438 107 ntBASIC0.8□□□□□ -2.28
CDH6P55285 Y_RNA.265-201ENST00000364677 108 ntBASIC0.8□□□□□ -2.28
CDH6P55285 SNORD116-11-201ENST00000383882 92 ntBASIC0.8□□□□□ -2.28
CDH6P55285 Y_RNA.405-201ENST00000383979 100 ntBASIC0.8□□□□□ -2.28
CDH6P55285 Y_RNA.451-201ENST00000384200 100 ntBASIC0.8□□□□□ -2.28
CDH6P55285 Y_RNA.524-201ENST00000384564 100 ntBASIC0.8□□□□□ -2.28
CDH6P55285 Y_RNA.559-201ENST00000384686 107 ntBASIC0.8□□□□□ -2.28
CDH6P55285 Y_RNA.561-201ENST00000384694 100 ntBASIC0.8□□□□□ -2.28
CDH6P55285 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
CDH6P55285 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH6P55285 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH6P55285 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.8□□□□□ -2.28
CDH6P55285 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH6P55285 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
CDH6P55285 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH6P55285 PDCD5P2-201ENST00000507570 312 ntBASIC0.8□□□□□ -2.28
CDH6P55285 AC097462.1-201ENST00000514125 324 ntBASIC0.8□□□□□ -2.28
CDH6P55285 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.8□□□□□ -2.28
CDH6P55285 MIR4273-201ENST00000582824 84 ntBASIC0.8□□□□□ -2.28
CDH6P55285 MIR3942-201ENST00000585264 109 ntBASIC0.8□□□□□ -2.28
CDH6P55285 MIR6504-201ENST00000613520 61 ntBASIC0.8□□□□□ -2.28
CDH6P55285 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH6P55285 MIR1321-201ENST00000637766 79 ntBASIC0.8□□□□□ -2.28
CDH6P55285 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
CDH6P55285 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CDH6P55285 Y_RNA.124-201ENST00000363339 93 ntBASIC0.79□□□□□ -2.28
CDH6P55285 Y_RNA.164-201ENST00000363709 102 ntBASIC0.79□□□□□ -2.28
CDH6P55285 SNORA80D-201ENST00000384488 135 ntBASIC0.79□□□□□ -2.28
CDH6P55285 RNU2-64P-201ENST00000411315 191 ntBASIC0.79□□□□□ -2.28
CDH6P55285 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
CDH6P55285 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
CDH6P55285 MTND3P23-201ENST00000431980 347 ntBASIC0.79□□□□□ -2.28
CDH6P55285 MTND1P29-201ENST00000448112 647 ntBASIC0.79□□□□□ -2.28
CDH6P55285 RPL39P39-201ENST00000455840 151 ntBASIC0.79□□□□□ -2.28
CDH6P55285 AC018710.1-201ENST00000506509 158 ntBASIC0.79□□□□□ -2.28
CDH6P55285 RNU6-917P-201ENST00000516294 104 ntBASIC0.79□□□□□ -2.28
CDH6P55285 Y_RNA.683-201ENST00000516508 93 ntBASIC0.79□□□□□ -2.28
CDH6P55285 RNU6-314P-201ENST00000516574 104 ntBASIC0.79□□□□□ -2.28
CDH6P55285 AL590705.4-201ENST00000532209 134 ntBASIC0.79□□□□□ -2.28
CDH6P55285 AC090617.10-201ENST00000624308 134 ntBASIC0.79□□□□□ -2.28
CDH6P55285 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CDH6P55285 RNU6-1059P-201ENST00000363752 98 ntBASIC0.78□□□□□ -2.28
CDH6P55285 Y_RNA.267-201ENST00000364679 109 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms