Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
COPB1P53618 RNU6-1266P-201ENST00000362794 105 ntBASIC2.45□□□□□ -2.02
COPB1P53618 RNU6-1305P-201ENST00000364353 104 ntBASIC2.45□□□□□ -2.02
COPB1P53618 Y_RNA.552-201ENST00000384665 112 ntBASIC2.45□□□□□ -2.02
COPB1P53618 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COPB1P53618 MIR300-201ENST00000401138 83 ntBASIC2.45□□□□□ -2.02
COPB1P53618 RNU2-14P-201ENST00000411053 191 ntBASIC2.45□□□□□ -2.02
COPB1P53618 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.45□□□□□ -2.02
COPB1P53618 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.45□□□□□ -2.02
COPB1P53618 TOMM22P2-201ENST00000430735 237 ntBASIC2.45□□□□□ -2.02
COPB1P53618 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.45□□□□□ -2.02
COPB1P53618 CYP2C59P-201ENST00000457790 269 ntBASIC2.45□□□□□ -2.02
COPB1P53618 snoU13.26-201ENST00000459452 105 ntBASIC2.45□□□□□ -2.02
COPB1P53618 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.45□□□□□ -2.02
COPB1P53618 RNU6-107P-201ENST00000516643 102 ntBASIC2.45□□□□□ -2.02
COPB1P53618 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.45□□□□□ -2.02
COPB1P53618 AC022616.8-201ENST00000533569 253 ntBASIC2.45□□□□□ -2.02
COPB1P53618 MIR3668-201ENST00000582138 75 ntBASIC2.45□□□□□ -2.02
COPB1P53618 MIR3117-201ENST00000584034 78 ntBASIC2.45□□□□□ -2.02
COPB1P53618 MIR3616-201ENST00000584070 92 ntBASIC2.45□□□□□ -2.02
COPB1P53618 MIR7843-201ENST00000622274 79 ntBASIC2.45□□□□□ -2.02
COPB1P53618 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.44□□□□□ -2.02
COPB1P53618 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.44□□□□□ -2.02
COPB1P53618 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.44□□□□□ -2.02
COPB1P53618 SNORD27-201ENST00000363981 72 ntBASIC2.44□□□□□ -2.02
COPB1P53618 Y_RNA.277-201ENST00000364754 102 ntBASIC2.44□□□□□ -2.02
COPB1P53618 SNORD31B-201ENST00000364977 69 ntBASIC2.44□□□□□ -2.02
COPB1P53618 RNU6-546P-201ENST00000383991 107 ntBASIC2.44□□□□□ -2.02
COPB1P53618 SNORA53-201ENST00000391141 249 ntBASIC2.44□□□□□ -2.02
COPB1P53618 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COPB1P53618 MIR1283-1-201ENST00000408494 87 ntBASIC2.44□□□□□ -2.02
COPB1P53618 MIR1185-2-201ENST00000408687 86 ntBASIC2.44□□□□□ -2.02
COPB1P53618 RNU2-32P-201ENST00000411193 191 ntBASIC2.44□□□□□ -2.02
COPB1P53618 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
COPB1P53618 MTCO1P5-201ENST00000433573 344 ntBASIC2.44□□□□□ -2.02
COPB1P53618 MRPS10P1-201ENST00000448483 130 ntBASIC2.44□□□□□ -2.02
COPB1P53618 AC011753.1-201ENST00000451001 220 ntBASIC2.44□□□□□ -2.02
COPB1P53618 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.44□□□□□ -2.02
COPB1P53618 RNU6-965P-201ENST00000516721 96 ntBASIC2.44□□□□□ -2.02
COPB1P53618 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.44□□□□□ -2.02
COPB1P53618 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.44□□□□□ -2.02
COPB1P53618 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.43□□□□□ -2.02
COPB1P53618 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
COPB1P53618 RNY1-201ENST00000364228 113 ntBASIC2.43□□□□□ -2.02
COPB1P53618 Y_RNA.243-201ENST00000364481 109 ntBASIC2.43□□□□□ -2.02
COPB1P53618 RNU6-338P-201ENST00000383888 105 ntBASIC2.43□□□□□ -2.02
COPB1P53618 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
COPB1P53618 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.43□□□□□ -2.02
COPB1P53618 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
COPB1P53618 POLR2KP2-201ENST00000438155 177 ntBASIC2.43□□□□□ -2.02
COPB1P53618 AC016925.1-201ENST00000458303 298 ntBASIC2.43□□□□□ -2.02
COPB1P53618 AC018868.1-201ENST00000491307 315 ntBASIC2.43□□□□□ -2.02
COPB1P53618 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.43□□□□□ -2.02
COPB1P53618 RNU6-436P-201ENST00000516171 114 ntBASIC2.43□□□□□ -2.02
COPB1P53618 RNU6-155P-201ENST00000516347 100 ntBASIC2.43□□□□□ -2.02
COPB1P53618 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.43□□□□□ -2.02
COPB1P53618 BX284668.6-201ENST00000606899 438 ntBASIC2.43□□□□□ -2.02
COPB1P53618 AC009831.4-201ENST00000620744 325 ntBASIC2.43□□□□□ -2.02
COPB1P53618 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COPB1P53618 ZNF658B-202ENST00000615961 3375 ntBASIC2.42□□□□□ -2.02
COPB1P53618 RNA5SP240-201ENST00000365355 128 ntBASIC2.42□□□□□ -2.02
COPB1P53618 Y_RNA.361-201ENST00000365515 120 ntBASIC2.42□□□□□ -2.02
COPB1P53618 U3.40-201ENST00000408706 208 ntBASIC2.42□□□□□ -2.02
COPB1P53618 AL445687.1-201ENST00000439946 251 ntBASIC2.42□□□□□ -2.02
COPB1P53618 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
COPB1P53618 RNU6-237P-201ENST00000515985 71 ntBASIC2.42□□□□□ -2.02
COPB1P53618 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.42□□□□□ -2.02
COPB1P53618 RPL21P9-201ENST00000556149 474 ntBASIC2.42□□□□□ -2.02
COPB1P53618 MIR5002-201ENST00000584713 97 ntBASIC2.42□□□□□ -2.02
COPB1P53618 AC005828.6-201ENST00000606610 232 ntBASIC2.42□□□□□ -2.02
COPB1P53618 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COPB1P53618 UBE2WP1-201ENST00000362030 340 ntBASIC2.41□□□□□ -2.02
COPB1P53618 Y_RNA.44-201ENST00000362676 108 ntBASIC2.41□□□□□ -2.02
COPB1P53618 SNORD115-30-201ENST00000364117 82 ntBASIC2.41□□□□□ -2.02
COPB1P53618 RNU6-975P-201ENST00000384296 105 ntBASIC2.41□□□□□ -2.02
COPB1P53618 SNORA67.4-201ENST00000384688 142 ntBASIC2.41□□□□□ -2.02
COPB1P53618 MIR221-201ENST00000385135 110 ntBASIC2.41□□□□□ -2.02
COPB1P53618 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.41□□□□□ -2.02
COPB1P53618 RNU4-53P-201ENST00000410828 140 ntBASIC2.41□□□□□ -2.02
COPB1P53618 AC091959.1-201ENST00000495857 238 ntBASIC2.41□□□□□ -2.02
COPB1P53618 IGLV3-17-201ENST00000519099 244 ntBASIC2.41□□□□□ -2.02
COPB1P53618 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.41□□□□□ -2.02
COPB1P53618 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.41□□□□□ -2.02
COPB1P53618 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.4□□□□□ -2.03
COPB1P53618 Y_RNA.54-201ENST00000362766 105 ntBASIC2.4□□□□□ -2.03
COPB1P53618 Y_RNA.269-201ENST00000364685 89 ntBASIC2.4□□□□□ -2.03
COPB1P53618 Y_RNA.275-201ENST00000364726 110 ntBASIC2.4□□□□□ -2.03
COPB1P53618 RNU6-740P-201ENST00000364734 105 ntBASIC2.4□□□□□ -2.03
COPB1P53618 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
COPB1P53618 Y_RNA.329-201ENST00000365209 107 ntBASIC2.4□□□□□ -2.03
COPB1P53618 RNU2-63P-201ENST00000410792 194 ntBASIC2.4□□□□□ -2.03
COPB1P53618 AL139109.1-201ENST00000455491 297 ntBASIC2.4□□□□□ -2.03
COPB1P53618 RNU7-57P-201ENST00000459540 60 ntBASIC2.4□□□□□ -2.03
COPB1P53618 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.4□□□□□ -2.03
COPB1P53618 RNU6-191P-201ENST00000516295 94 ntBASIC2.4□□□□□ -2.03
COPB1P53618 RNA5SP281-201ENST00000516504 135 ntBASIC2.4□□□□□ -2.03
COPB1P53618 SNORA27.4-201ENST00000516650 95 ntBASIC2.4□□□□□ -2.03
COPB1P53618 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
COPB1P53618 AC121758.2-201ENST00000553271 193 ntBASIC2.4□□□□□ -2.03
COPB1P53618 MIR3145-201ENST00000580727 82 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms