Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.85□□□□□ -2.27
ACLYP53396 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.85□□□□□ -2.27
ACLYP53396 SEPT14P3-201ENST00000439401 183 ntBASIC0.85□□□□□ -2.27
ACLYP53396 AL732372.2-207ENST00000445840 183 ntBASIC0.85□□□□□ -2.27
ACLYP53396 SEPT14P2-201ENST00000453405 183 ntBASIC0.85□□□□□ -2.27
ACLYP53396 AC010486.3-201ENST00000511602 785 ntBASIC0.85□□□□□ -2.27
ACLYP53396 SEPT14P4-201ENST00000513445 186 ntBASIC0.85□□□□□ -2.27
ACLYP53396 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
ACLYP53396 Y_RNA.665-201ENST00000516177 98 ntBASIC0.85□□□□□ -2.27
ACLYP53396 FO082796.1-201ENST00000523795 183 ntBASIC0.85□□□□□ -2.27
ACLYP53396 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.85□□□□□ -2.27
ACLYP53396 MTND3P12-201ENST00000559068 328 ntBASIC0.85□□□□□ -2.27
ACLYP53396 MTND1P15-201ENST00000579262 949 ntBASIC0.85□□□□□ -2.27
ACLYP53396 MIR3611-201ENST00000584484 83 ntBASIC0.85□□□□□ -2.27
ACLYP53396 RN7SKP299-201ENST00000606679 301 ntBASIC0.85□□□□□ -2.27
ACLYP53396 SNORA28-201ENST00000606769 126 ntBASIC0.85□□□□□ -2.27
ACLYP53396 AC007742.2-201ENST00000618226 398 ntBASIC0.85□□□□□ -2.27
ACLYP53396 AC099654.12-201ENST00000639868 649 ntBASIC0.85□□□□□ -2.27
ACLYP53396 RNU5F-3P-201ENST00000363767 117 ntBASIC0.84□□□□□ -2.27
ACLYP53396 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
ACLYP53396 RNU6-280P-201ENST00000364145 104 ntBASIC0.84□□□□□ -2.27
ACLYP53396 Y_RNA.372-201ENST00000365599 102 ntBASIC0.84□□□□□ -2.27
ACLYP53396 RNU6-95P-201ENST00000384697 107 ntBASIC0.84□□□□□ -2.27
ACLYP53396 RNU6-541P-201ENST00000384709 110 ntBASIC0.84□□□□□ -2.27
ACLYP53396 MIR653-201ENST00000385279 96 ntBASIC0.84□□□□□ -2.27
ACLYP53396 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
ACLYP53396 MRPS10P1-201ENST00000448483 130 ntBASIC0.84□□□□□ -2.27
ACLYP53396 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
ACLYP53396 Y_RNA.693-201ENST00000516641 110 ntBASIC0.84□□□□□ -2.27
ACLYP53396 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.84□□□□□ -2.27
ACLYP53396 PIGPP4-201ENST00000584447 307 ntBASIC0.84□□□□□ -2.27
ACLYP53396 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
ACLYP53396 AL359880.1-201ENST00000621879 266 ntBASIC0.84□□□□□ -2.27
ACLYP53396 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ACLYP53396 MIR517A-201ENST00000385001 87 ntBASIC0.83□□□□□ -2.28
ACLYP53396 RNU6-159P-201ENST00000391080 106 ntBASIC0.83□□□□□ -2.28
ACLYP53396 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.83□□□□□ -2.28
ACLYP53396 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.83□□□□□ -2.28
ACLYP53396 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.83□□□□□ -2.28
ACLYP53396 RPL30P10-201ENST00000488148 337 ntBASIC0.83□□□□□ -2.28
ACLYP53396 TRBVA-201ENST00000498804 316 ntBASIC0.83□□□□□ -2.28
ACLYP53396 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.83□□□□□ -2.28
ACLYP53396 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.83□□□□□ -2.28
ACLYP53396 ACA59.1-201ENST00000515966 143 ntBASIC0.83□□□□□ -2.28
ACLYP53396 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
ACLYP53396 RNA5SP168-201ENST00000516642 112 ntBASIC0.83□□□□□ -2.28
ACLYP53396 AC090049.2-201ENST00000550377 109 ntBASIC0.83□□□□□ -2.28
ACLYP53396 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
ACLYP53396 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
ACLYP53396 AC009248.2-201ENST00000619826 254 ntBASIC0.83□□□□□ -2.28
ACLYP53396 AC006435.5-201ENST00000624486 112 ntBASIC0.83□□□□□ -2.28
ACLYP53396 AC008133.2-201ENST00000624540 351 ntBASIC0.83□□□□□ -2.28
ACLYP53396 AC124864.2-201ENST00000624736 186 ntBASIC0.83□□□□□ -2.28
ACLYP53396 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
ACLYP53396 RNU6-259P-201ENST00000383999 107 ntBASIC0.82□□□□□ -2.28
ACLYP53396 RPL30P16-201ENST00000419341 429 ntBASIC0.82□□□□□ -2.28
ACLYP53396 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.82□□□□□ -2.28
ACLYP53396 AL590632.1-201ENST00000424289 371 ntBASIC0.82□□□□□ -2.28
ACLYP53396 MTND4P18-201ENST00000447010 465 ntBASIC0.82□□□□□ -2.28
ACLYP53396 MTND1P11-201ENST00000456661 876 ntBASIC0.82□□□□□ -2.28
ACLYP53396 RPS27P22-201ENST00000478056 241 ntBASIC0.82□□□□□ -2.28
ACLYP53396 AC093303.1-201ENST00000514549 295 ntBASIC0.82□□□□□ -2.28
ACLYP53396 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
ACLYP53396 AC023157.2-201ENST00000540596 141 ntBASIC0.82□□□□□ -2.28
ACLYP53396 AL512360.1-201ENST00000555346 234 ntBASIC0.82□□□□□ -2.28
ACLYP53396 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.82□□□□□ -2.28
ACLYP53396 ZNF519P2-201ENST00000557032 169 ntBASIC0.82□□□□□ -2.28
ACLYP53396 UBL5P4-201ENST00000562584 236 ntBASIC0.82□□□□□ -2.28
ACLYP53396 AC010525.2-201ENST00000590920 195 ntBASIC0.82□□□□□ -2.28
ACLYP53396 AC080078.2-201ENST00000603766 501 ntBASIC0.82□□□□□ -2.28
ACLYP53396 AC068137.4-201ENST00000638485 296 ntBASIC0.82□□□□□ -2.28
ACLYP53396 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
ACLYP53396 Y_RNA.30-201ENST00000362572 97 ntBASIC0.81□□□□□ -2.28
ACLYP53396 Y_RNA.100-201ENST00000363141 102 ntBASIC0.81□□□□□ -2.28
ACLYP53396 SNORD114-23-201ENST00000363536 72 ntBASIC0.81□□□□□ -2.28
ACLYP53396 Y_RNA.179-201ENST00000363844 90 ntBASIC0.81□□□□□ -2.28
ACLYP53396 Y_RNA.184-201ENST00000363884 108 ntBASIC0.81□□□□□ -2.28
ACLYP53396 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
ACLYP53396 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
ACLYP53396 Y_RNA.373-201ENST00000365600 103 ntBASIC0.81□□□□□ -2.28
ACLYP53396 AL451046.2-201ENST00000403074 277 ntBASIC0.81□□□□□ -2.28
ACLYP53396 AC002429.1-201ENST00000437672 148 ntBASIC0.81□□□□□ -2.28
ACLYP53396 MTCO3P18-201ENST00000440206 761 ntBASIC0.81□□□□□ -2.28
ACLYP53396 SNORD65B-201ENST00000459126 73 ntBASIC0.81□□□□□ -2.28
ACLYP53396 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
ACLYP53396 RNU6-322P-201ENST00000516010 103 ntBASIC0.81□□□□□ -2.28
ACLYP53396 AC027419.1-201ENST00000522976 328 ntBASIC0.81□□□□□ -2.28
ACLYP53396 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.81□□□□□ -2.28
ACLYP53396 AC010620.1-201ENST00000601088 1102 ntBASIC0.81□□□□□ -2.28
ACLYP53396 AL138726.1-201ENST00000614873 333 ntBASIC0.81□□□□□ -2.28
ACLYP53396 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.81□□□□□ -2.28
ACLYP53396 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.81□□□□□ -2.28
ACLYP53396 RNU6-1252P-201ENST00000363054 104 ntBASIC0.8□□□□□ -2.28
ACLYP53396 RNU6-424P-201ENST00000384367 105 ntBASIC0.8□□□□□ -2.28
ACLYP53396 RNU2-66P-201ENST00000410650 161 ntBASIC0.8□□□□□ -2.28
ACLYP53396 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.8□□□□□ -2.28
ACLYP53396 CALM2P4-201ENST00000430810 426 ntBASIC0.8□□□□□ -2.28
ACLYP53396 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.8□□□□□ -2.28
ACLYP53396 RNU6-947P-201ENST00000516264 106 ntBASIC0.8□□□□□ -2.28
ACLYP53396 RNU6-917P-201ENST00000516294 104 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms