Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CLK3P49761 AC080128.1-201ENST00000474389 1917 ntBASIC2.66□□□□□ -1.98
CLK3P49761 RNU6-899P-201ENST00000363947 107 ntBASIC2.66□□□□□ -1.98
CLK3P49761 SNORA25.6-201ENST00000364121 118 ntBASIC2.66□□□□□ -1.98
CLK3P49761 RNU6-461P-201ENST00000364195 107 ntBASIC2.66□□□□□ -1.98
CLK3P49761 snoU2_19.4-201ENST00000364329 80 ntBASIC2.66□□□□□ -1.98
CLK3P49761 Y_RNA.243-201ENST00000364481 109 ntBASIC2.66□□□□□ -1.98
CLK3P49761 Y_RNA.273-201ENST00000364703 102 ntBASIC2.66□□□□□ -1.98
CLK3P49761 SNORA72.4-201ENST00000384174 132 ntBASIC2.66□□□□□ -1.98
CLK3P49761 MIR627-201ENST00000384979 97 ntBASIC2.66□□□□□ -1.98
CLK3P49761 MIR218-1-201ENST00000384999 110 ntBASIC2.66□□□□□ -1.98
CLK3P49761 MIR483-201ENST00000385070 76 ntBASIC2.66□□□□□ -1.98
CLK3P49761 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLK3P49761 AL355497.1-201ENST00000406262 551 ntBASIC2.66□□□□□ -1.98
CLK3P49761 RPL30P4-201ENST00000429309 333 ntBASIC2.66□□□□□ -1.98
CLK3P49761 S100A11P2-201ENST00000467589 312 ntBASIC2.66□□□□□ -1.98
CLK3P49761 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.66□□□□□ -1.98
CLK3P49761 AC022616.8-201ENST00000533569 253 ntBASIC2.66□□□□□ -1.98
CLK3P49761 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.66□□□□□ -1.98
CLK3P49761 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CLK3P49761 AC134026.1-201ENST00000623249 2239 ntBASIC2.66□□□□□ -1.98
CLK3P49761 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CLK3P49761 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CLK3P49761 RNU4-11P-201ENST00000365287 132 ntBASIC2.65□□□□□ -1.99
CLK3P49761 Y_RNA.353-201ENST00000365440 108 ntBASIC2.65□□□□□ -1.99
CLK3P49761 SNORD20-201ENST00000384550 80 ntBASIC2.65□□□□□ -1.99
CLK3P49761 MIR512-1-201ENST00000384913 84 ntBASIC2.65□□□□□ -1.99
CLK3P49761 MIR513C-201ENST00000401352 84 ntBASIC2.65□□□□□ -1.99
CLK3P49761 U6atac.2-201ENST00000408644 118 ntBASIC2.65□□□□□ -1.99
CLK3P49761 AC004866.1-201ENST00000411748 78 ntBASIC2.65□□□□□ -1.99
CLK3P49761 MTND4LP9-201ENST00000427694 174 ntBASIC2.65□□□□□ -1.99
CLK3P49761 TOMM22P2-201ENST00000430735 237 ntBASIC2.65□□□□□ -1.99
CLK3P49761 AC004386.2-201ENST00000441858 148 ntBASIC2.65□□□□□ -1.99
CLK3P49761 AL137159.1-201ENST00000452808 512 ntBASIC2.65□□□□□ -1.99
CLK3P49761 AC023141.11-201ENST00000508864 202 ntBASIC2.65□□□□□ -1.99
CLK3P49761 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.65□□□□□ -1.99
CLK3P49761 DEFB131C-201ENST00000528817 165 ntBASIC2.65□□□□□ -1.99
CLK3P49761 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.65□□□□□ -1.99
CLK3P49761 MIR5688-201ENST00000580619 83 ntBASIC2.65□□□□□ -1.99
CLK3P49761 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.65□□□□□ -1.99
CLK3P49761 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLK3P49761 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CLK3P49761 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLK3P49761 Y_RNA.40-201ENST00000362645 93 ntBASIC2.64□□□□□ -1.99
CLK3P49761 RNU6-655P-201ENST00000362858 107 ntBASIC2.64□□□□□ -1.99
CLK3P49761 Y_RNA.127-201ENST00000363386 109 ntBASIC2.64□□□□□ -1.99
CLK3P49761 U3.9-201ENST00000363823 204 ntBASIC2.64□□□□□ -1.99
CLK3P49761 SNORD87-201ENST00000364849 89 ntBASIC2.64□□□□□ -1.99
CLK3P49761 Y_RNA.293-201ENST00000364908 93 ntBASIC2.64□□□□□ -1.99
CLK3P49761 RNU6-215P-201ENST00000365169 102 ntBASIC2.64□□□□□ -1.99
CLK3P49761 Y_RNA.368-201ENST00000365547 113 ntBASIC2.64□□□□□ -1.99
CLK3P49761 SNORA9-201ENST00000384215 133 ntBASIC2.64□□□□□ -1.99
CLK3P49761 RNA5SP504-201ENST00000410676 117 ntBASIC2.64□□□□□ -1.99
CLK3P49761 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.64□□□□□ -1.99
CLK3P49761 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.64□□□□□ -1.99
CLK3P49761 EIF4EP4-201ENST00000424916 578 ntBASIC2.64□□□□□ -1.99
CLK3P49761 AIMP1P2-201ENST00000425294 312 ntBASIC2.64□□□□□ -1.99
CLK3P49761 AC027124.2-201ENST00000428249 105 ntBASIC2.64□□□□□ -1.99
CLK3P49761 SNORA25.12-201ENST00000516202 82 ntBASIC2.64□□□□□ -1.99
CLK3P49761 SCARNA13-201ENST00000516672 275 ntBASIC2.64□□□□□ -1.99
CLK3P49761 AC109810.1-201ENST00000534066 224 ntBASIC2.64□□□□□ -1.99
CLK3P49761 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.64□□□□□ -1.99
CLK3P49761 MIR3616-201ENST00000584070 92 ntBASIC2.64□□□□□ -1.99
CLK3P49761 Y_RNA.802-201ENST00000614892 130 ntBASIC2.64□□□□□ -1.99
CLK3P49761 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CLK3P49761 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.64□□□□□ -1.99
CLK3P49761 AC068700.1-201ENST00000565862 3754 ntBASIC2.63□□□□□ -1.99
CLK3P49761 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
CLK3P49761 RNU4-15P-201ENST00000362613 141 ntBASIC2.63□□□□□ -1.99
CLK3P49761 RNU6-1210P-201ENST00000363775 107 ntBASIC2.63□□□□□ -1.99
CLK3P49761 Y_RNA.218-201ENST00000364218 104 ntBASIC2.63□□□□□ -1.99
CLK3P49761 RNU4-10P-201ENST00000364383 140 ntBASIC2.63□□□□□ -1.99
CLK3P49761 Y_RNA.261-201ENST00000364631 102 ntBASIC2.63□□□□□ -1.99
CLK3P49761 Y_RNA.337-201ENST00000365312 102 ntBASIC2.63□□□□□ -1.99
CLK3P49761 MIR539-201ENST00000365690 78 ntBASIC2.63□□□□□ -1.99
CLK3P49761 Y_RNA.456-201ENST00000384232 111 ntBASIC2.63□□□□□ -1.99
CLK3P49761 MIR616-201ENST00000385293 97 ntBASIC2.63□□□□□ -1.99
CLK3P49761 MIR526A2-201ENST00000390198 65 ntBASIC2.63□□□□□ -1.99
CLK3P49761 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.63□□□□□ -1.99
CLK3P49761 SNORA74D-201ENST00000516404 141 ntBASIC2.63□□□□□ -1.99
CLK3P49761 AC105245.1-201ENST00000581934 244 ntBASIC2.63□□□□□ -1.99
CLK3P49761 MIR5006-201ENST00000583027 110 ntBASIC2.63□□□□□ -1.99
CLK3P49761 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.63□□□□□ -1.99
CLK3P49761 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
CLK3P49761 AL359881.1-201ENST00000602916 267 ntBASIC2.63□□□□□ -1.99
CLK3P49761 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CLK3P49761 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CLK3P49761 Y_RNA.24-201ENST00000362508 103 ntBASIC2.62□□□□□ -1.99
CLK3P49761 Y_RNA.341-201ENST00000365341 102 ntBASIC2.62□□□□□ -1.99
CLK3P49761 Y_RNA.361-201ENST00000365515 120 ntBASIC2.62□□□□□ -1.99
CLK3P49761 SNORD116-14-201ENST00000383894 92 ntBASIC2.62□□□□□ -1.99
CLK3P49761 SNORD116-17-201ENST00000383929 92 ntBASIC2.62□□□□□ -1.99
CLK3P49761 SNORD116-15-201ENST00000384445 92 ntBASIC2.62□□□□□ -1.99
CLK3P49761 SNORD116-19-201ENST00000384729 92 ntBASIC2.62□□□□□ -1.99
CLK3P49761 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.62□□□□□ -1.99
CLK3P49761 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.62□□□□□ -1.99
CLK3P49761 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.62□□□□□ -1.99
CLK3P49761 RPS3P1-201ENST00000456781 192 ntBASIC2.62□□□□□ -1.99
CLK3P49761 AC080013.2-201ENST00000460866 323 ntBASIC2.62□□□□□ -1.99
CLK3P49761 AC114982.1-201ENST00000469402 321 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms