Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SNORD65B-201ENST00000459126 73 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 YWHAEP4-201ENST00000505390 198 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 SNORA40.15-201ENST00000516884 107 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 RNU6-897P-201ENST00000517135 105 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 RNU2-12P-201ENST00000517216 168 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 AC131281.1-201ENST00000522984 164 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 AL353621.2-201ENST00000605340 133 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 AC006435.5-201ENST00000624486 112 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 U6.115-201ENST00000636045 103 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 MIR338-201ENST00000636369 67 ntBASIC1.88□□□□□ -2.11
APOBEC1P41238 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
APOBEC1P41238 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
APOBEC1P41238 AC092881.1-201ENST00000638218 2733 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 Y_RNA.101-201ENST00000363154 102 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 RNU6-301P-201ENST00000384277 107 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 Y_RNA.570-201ENST00000384750 101 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 RNU2-54P-201ENST00000410299 190 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 RPL23AP36-201ENST00000413895 458 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 AC113618.1-201ENST00000416747 285 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.87□□□□□ -2.11
APOBEC1P41238 AC090255.1-201ENST00000495779 349 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 RNU6-1143P-201ENST00000516125 104 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.87□□□□□ -2.11
APOBEC1P41238 AL137100.2-201ENST00000555786 315 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 AC055872.1-201ENST00000570978 278 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 MIR4423-201ENST00000580922 80 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 AC022441.3-201ENST00000605737 136 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 AC011373.1-201ENST00000607270 237 ntBASIC1.87□□□□□ -2.11
APOBEC1P41238 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
APOBEC1P41238 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
APOBEC1P41238 RNU6-862P-201ENST00000362804 105 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 Y_RNA.145-201ENST00000363527 102 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 Y_RNA.210-201ENST00000364161 110 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 RNU1-96P-201ENST00000364163 162 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 Y_RNA.243-201ENST00000364481 109 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 Y_RNA.276-201ENST00000364732 109 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 Y_RNA.446-201ENST00000384178 104 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 SNORA20B-201ENST00000384220 132 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 RNU6-937P-201ENST00000384325 106 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 RNU6-417P-201ENST00000384712 107 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 MIR515-2-201ENST00000384883 83 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 MIR515-1-201ENST00000384884 83 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 SNORA48.1-201ENST00000390879 135 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBEC1P41238 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.86□□□□□ -2.11
APOBEC1P41238 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
APOBEC1P41238 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.86□□□□□ -2.11
APOBEC1P41238 CST2P1-201ENST00000425770 87 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 AC005042.3-201ENST00000453230 174 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 RNU7-110P-201ENST00000516891 62 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 Y_RNA.720-201ENST00000517166 92 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 IGKV3-31-201ENST00000523109 329 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 AC091544.4-201ENST00000555268 342 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.86□□□□□ -2.11
APOBEC1P41238 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
APOBEC1P41238 Y_RNA.153-201ENST00000363615 91 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 RNU6-271P-201ENST00000363858 105 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 SNORA63C-201ENST00000364578 129 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 Y_RNA.287-201ENST00000364853 94 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 RNU6-21P-201ENST00000384710 107 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 AL117342.1-201ENST00000404861 406 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 RNU2-20P-201ENST00000410425 191 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
APOBEC1P41238 AL021397.1-201ENST00000451806 248 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 RNU6-155P-201ENST00000516347 100 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 SCARNA15.1-201ENST00000516384 125 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 RNU6-1046P-201ENST00000516538 107 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.85□□□□□ -2.11
APOBEC1P41238 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 MIR376A1-201ENST00000616574 68 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 AC022513.1-201ENST00000624512 117 ntBASIC1.85□□□□□ -2.11
APOBEC1P41238 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
APOBEC1P41238 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
APOBEC1P41238 CENPCP1-201ENST00000533085 2578 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 Y_RNA.162-201ENST00000363683 102 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 Y_RNA.331-201ENST00000365267 102 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 RNU6-738P-201ENST00000384531 106 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AL355796.1-201ENST00000406706 323 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 RPS27P22-201ENST00000478056 241 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AC010655.3-201ENST00000478818 450 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 SEPT14P8-201ENST00000508026 178 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 MRPS35P2-201ENST00000508242 191 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 RNY3P15-201ENST00000516297 97 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.84□□□□□ -2.11
APOBEC1P41238 AC027419.1-201ENST00000522976 328 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.84□□□□□ -2.11
APOBEC1P41238 AC002984.1-201ENST00000591692 448 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AC008737.2-201ENST00000599446 118 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AC069114.2-201ENST00000604699 304 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AC005828.6-201ENST00000606610 232 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 SNORD113-5-201ENST00000607261 78 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms