Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 SUMO2P18-201ENST00000518873 252 ntBASIC1.69□□□□□ -2.14
SOX3P41225 GNAI2P1-201ENST00000541815 315 ntBASIC1.69□□□□□ -2.14
SOX3P41225 MIR1302-2-201ENST00000607096 138 ntBASIC1.69□□□□□ -2.14
SOX3P41225 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.69□□□□□ -2.14
SOX3P41225 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SOX3P41225 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
SOX3P41225 SNORD78.2-201ENST00000391076 69 ntBASIC1.68□□□□□ -2.14
SOX3P41225 Y_RNA.645-201ENST00000391229 102 ntBASIC1.68□□□□□ -2.14
SOX3P41225 RNA5SP501-201ENST00000410990 112 ntBASIC1.68□□□□□ -2.14
SOX3P41225 AC016909.1-201ENST00000415916 166 ntBASIC1.68□□□□□ -2.14
SOX3P41225 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.68□□□□□ -2.14
SOX3P41225 ATP5J2P3-201ENST00000451550 258 ntBASIC1.68□□□□□ -2.14
SOX3P41225 AC112492.4-201ENST00000456549 352 ntBASIC1.68□□□□□ -2.14
SOX3P41225 RNA5SP233-201ENST00000459153 113 ntBASIC1.68□□□□□ -2.14
SOX3P41225 RPL26P26-201ENST00000480251 434 ntBASIC1.68□□□□□ -2.14
SOX3P41225 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
SOX3P41225 AC093852.1-201ENST00000503587 266 ntBASIC1.68□□□□□ -2.14
SOX3P41225 AC015712.3-201ENST00000559380 164 ntBASIC1.68□□□□□ -2.14
SOX3P41225 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
SOX3P41225 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
SOX3P41225 AC022432.1-201ENST00000595739 310 ntBASIC1.68□□□□□ -2.14
SOX3P41225 AL353149.1-201ENST00000610667 244 ntBASIC1.68□□□□□ -2.14
SOX3P41225 U1.36-201ENST00000620684 176 ntBASIC1.68□□□□□ -2.14
SOX3P41225 SDR42E1P4-201ENST00000620894 481 ntBASIC1.68□□□□□ -2.14
SOX3P41225 ZNF702P-202ENST00000434269 1966 ntBASIC1.67□□□□□ -2.14
SOX3P41225 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
SOX3P41225 RNU6-1240P-201ENST00000365155 104 ntBASIC1.67□□□□□ -2.14
SOX3P41225 Y_RNA.326-201ENST00000365176 113 ntBASIC1.67□□□□□ -2.14
SOX3P41225 SNORA48.1-201ENST00000390879 135 ntBASIC1.67□□□□□ -2.14
SOX3P41225 MRPL35P1-201ENST00000404272 572 ntBASIC1.67□□□□□ -2.14
SOX3P41225 AL117342.1-201ENST00000404861 406 ntBASIC1.67□□□□□ -2.14
SOX3P41225 AC008134.1-201ENST00000420943 193 ntBASIC1.67□□□□□ -2.14
SOX3P41225 FCF1P4-201ENST00000448326 183 ntBASIC1.67□□□□□ -2.14
SOX3P41225 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.67□□□□□ -2.14
SOX3P41225 RPL23AP3-201ENST00000453844 468 ntBASIC1.67□□□□□ -2.14
SOX3P41225 RNU6-625P-201ENST00000459412 107 ntBASIC1.67□□□□□ -2.14
SOX3P41225 AL163540.1-201ENST00000485382 386 ntBASIC1.67□□□□□ -2.14
SOX3P41225 AC010469.2-201ENST00000496412 480 ntBASIC1.67□□□□□ -2.14
SOX3P41225 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.67□□□□□ -2.14
SOX3P41225 AC107393.1-201ENST00000512403 346 ntBASIC1.67□□□□□ -2.14
SOX3P41225 RNU6-408P-201ENST00000515910 100 ntBASIC1.67□□□□□ -2.14
SOX3P41225 RNU6-1041P-201ENST00000516254 102 ntBASIC1.67□□□□□ -2.14
SOX3P41225 RNU6-988P-201ENST00000519081 107 ntBASIC1.67□□□□□ -2.14
SOX3P41225 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.67□□□□□ -2.14
SOX3P41225 AP003072.1-201ENST00000531740 145 ntBASIC1.67□□□□□ -2.14
SOX3P41225 HSBP1P1-201ENST00000555205 166 ntBASIC1.67□□□□□ -2.14
SOX3P41225 MIR4659A-201ENST00000580269 81 ntBASIC1.67□□□□□ -2.14
SOX3P41225 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.67□□□□□ -2.14
SOX3P41225 AC240442.1-201ENST00000616055 283 ntBASIC1.67□□□□□ -2.14
SOX3P41225 AC006001.4-201ENST00000622243 395 ntBASIC1.67□□□□□ -2.14
SOX3P41225 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
SOX3P41225 AC091932.3-201ENST00000624223 323 ntBASIC1.67□□□□□ -2.14
SOX3P41225 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.67□□□□□ -2.14
SOX3P41225 MIR338-201ENST00000636369 67 ntBASIC1.67□□□□□ -2.14
SOX3P41225 U6.92-201ENST00000636464 89 ntBASIC1.67□□□□□ -2.14
SOX3P41225 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SOX3P41225 AC091812.1-201ENST00000432235 1948 ntBASIC1.67□□□□□ -2.14
SOX3P41225 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SOX3P41225 AC008555.8-201ENST00000623602 2168 ntBASIC1.66□□□□□ -2.14
SOX3P41225 AC005592.1-201ENST00000566527 1640 ntBASIC1.66□□□□□ -2.14
SOX3P41225 RNU6-961P-201ENST00000363893 105 ntBASIC1.66□□□□□ -2.14
SOX3P41225 RNU6-926P-201ENST00000384075 107 ntBASIC1.66□□□□□ -2.14
SOX3P41225 RNA5SP475-201ENST00000410568 110 ntBASIC1.66□□□□□ -2.14
SOX3P41225 SDAD1P3-201ENST00000427380 333 ntBASIC1.66□□□□□ -2.14
SOX3P41225 RAB28P5-201ENST00000427490 651 ntBASIC1.66□□□□□ -2.14
SOX3P41225 AC005534.2-201ENST00000431047 433 ntBASIC1.66□□□□□ -2.14
SOX3P41225 AC099677.2-201ENST00000436385 175 ntBASIC1.66□□□□□ -2.14
SOX3P41225 HMGN2P23-201ENST00000456759 269 ntBASIC1.66□□□□□ -2.14
SOX3P41225 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.66□□□□□ -2.14
SOX3P41225 RNU6-1146P-201ENST00000516282 102 ntBASIC1.66□□□□□ -2.14
SOX3P41225 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
SOX3P41225 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
SOX3P41225 AP002001.1-203ENST00000534002 267 ntBASIC1.66□□□□□ -2.14
SOX3P41225 RPS29P30-201ENST00000600975 111 ntBASIC1.66□□□□□ -2.14
SOX3P41225 AL109918.3-201ENST00000603072 338 ntBASIC1.66□□□□□ -2.14
SOX3P41225 AL353621.2-201ENST00000605340 133 ntBASIC1.66□□□□□ -2.14
SOX3P41225 AC010205.1-201ENST00000616668 449 ntBASIC1.66□□□□□ -2.14
SOX3P41225 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.66□□□□□ -2.14
SOX3P41225 MIR3674-201ENST00000636576 68 ntBASIC1.66□□□□□ -2.14
SOX3P41225 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
SOX3P41225 RNU6-862P-201ENST00000362804 105 ntBASIC1.65□□□□□ -2.15
SOX3P41225 snoU2-30.2-201ENST00000362805 70 ntBASIC1.65□□□□□ -2.15
SOX3P41225 SNORD14.1-201ENST00000365609 90 ntBASIC1.65□□□□□ -2.15
SOX3P41225 RNU6-1310P-201ENST00000384153 107 ntBASIC1.65□□□□□ -2.15
SOX3P41225 Y_RNA.526-201ENST00000384572 110 ntBASIC1.65□□□□□ -2.15
SOX3P41225 AL512604.1-201ENST00000404812 257 ntBASIC1.65□□□□□ -2.15
SOX3P41225 AL158823.1-201ENST00000418441 478 ntBASIC1.65□□□□□ -2.15
SOX3P41225 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.65□□□□□ -2.15
SOX3P41225 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.65□□□□□ -2.15
SOX3P41225 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
SOX3P41225 AC040896.1-201ENST00000613819 479 ntBASIC1.65□□□□□ -2.15
SOX3P41225 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.64□□□□□ -2.15
SOX3P41225 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
SOX3P41225 RNU6-454P-201ENST00000364292 107 ntBASIC1.64□□□□□ -2.15
SOX3P41225 Y_RNA.287-201ENST00000364853 94 ntBASIC1.64□□□□□ -2.15
SOX3P41225 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
SOX3P41225 RNA5SP212-201ENST00000391223 107 ntBASIC1.64□□□□□ -2.15
SOX3P41225 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.64□□□□□ -2.15
SOX3P41225 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.64□□□□□ -2.15
SOX3P41225 HMGN2P34-201ENST00000437647 269 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms