Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNU6-1031P-201ENST00000384773 107 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 MIR548B-201ENST00000385247 97 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 RNU4-55P-201ENST00000410731 137 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.76□□□□□ -2.29
BRCA1P38398 MTCO2P30-201ENST00000503662 364 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 RNU6-947P-201ENST00000516264 106 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 UBL5P4-201ENST00000562584 236 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 AC023932.2-201ENST00000603176 175 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 AL390123.1-201ENST00000603216 237 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 BX284668.6-201ENST00000606899 438 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
BRCA1P38398 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
BRCA1P38398 SNORD116-1-201ENST00000384335 95 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 MTCYBP4-201ENST00000401524 249 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 DYNLT3P2-201ENST00000442517 295 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.75□□□□□ -2.29
BRCA1P38398 AC010424.1-201ENST00000506336 297 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 AC010486.3-201ENST00000511602 785 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 AP002001.1-203ENST00000534002 267 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 MIR4438-201ENST00000585271 93 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 AC012557.2-201ENST00000605919 418 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 RN7SKP299-201ENST00000606679 301 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 DISC2.1-201ENST00000612827 205 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 RNU6-199P-201ENST00000362954 107 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 RNU6-873P-201ENST00000363833 107 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 SNORD115-32-201ENST00000364079 82 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 Y_RNA.294-201ENST00000364916 102 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 TOMM22P2-201ENST00000430735 237 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.75□□□□□ -2.29
BRCA1P38398 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.75□□□□□ -2.29
BRCA1P38398 AL049830.1-201ENST00000468034 425 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 AC083798.1-201ENST00000472671 131 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 AC105758.1-201ENST00000506038 399 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.75□□□□□ -2.29
BRCA1P38398 AP001330.5-201ENST00000607176 411 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 Z99129.1-201ENST00000612510 255 ntBASIC0.75□□□□□ -2.29
BRCA1P38398 RNU6-833P-201ENST00000363486 107 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 Y_RNA.490-201ENST00000384413 102 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 AF228730.1-201ENST00000397972 663 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 ERLEC1P1-201ENST00000433806 578 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 MTCO1P19-201ENST00000443487 500 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 RNU6-956P-201ENST00000458868 103 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 AC010469.2-201ENST00000496412 480 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 Y_RNA.682-201ENST00000516457 100 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 ZNF519P2-201ENST00000557032 169 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 AL158211.1-201ENST00000566763 763 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 AC015688.6-201ENST00000577737 104 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
BRCA1P38398 RNU6-1085P-201ENST00000363576 107 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 Y_RNA.553-201ENST00000384670 102 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 MIR521-1-201ENST00000384902 87 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 RNA5SP219-201ENST00000390940 113 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 AL451046.2-201ENST00000403074 277 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 RNU6-648P-201ENST00000410190 107 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 snoU13.6-201ENST00000458785 104 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 MTCO1P29-201ENST00000496868 288 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.73□□□□□ -2.29
BRCA1P38398 SNORA28-201ENST00000606769 126 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.73□□□□□ -2.29
BRCA1P38398 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.73□□□□□ -2.29
BRCA1P38398 MTND5P26-201ENST00000426018 1752 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 Y_RNA.2-201ENST00000362330 96 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 RNU6-1187P-201ENST00000364771 110 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 Y_RNA.359-201ENST00000365498 102 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 DEFB108C-201ENST00000400154 252 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 CALM2P3-201ENST00000400429 449 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 AC008134.1-201ENST00000420943 193 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 STAG3L5P-204ENST00000443759 179 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 AC097462.1-201ENST00000514125 324 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 ACA59.1-201ENST00000515966 143 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 AL121757.2-201ENST00000611223 313 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 SNORD3E-202ENST00000627253 216 ntBASIC0.73□□□□□ -2.29
BRCA1P38398 RNA5SP327-201ENST00000362494 101 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 RNU6-727P-201ENST00000363592 107 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 SNORA22-201ENST00000383907 134 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 Y_RNA.409-201ENST00000383990 98 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 SNORA22C-201ENST00000384614 134 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 RNU6-331P-201ENST00000384724 107 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 MIR153-2-201ENST00000385225 87 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 PCNPP5-201ENST00000452246 481 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 RNU7-90P-201ENST00000459216 62 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 RNU7-66P-201ENST00000459469 62 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.72□□□□□ -2.29
BRCA1P38398 SNORD79.1-201ENST00000516069 84 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 RNU6-58P-201ENST00000517143 103 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 OSBPL9P5-201ENST00000542581 171 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.72□□□□□ -2.29
BRCA1P38398 AC121247.2-201ENST00000604776 136 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 AC040896.1-201ENST00000613819 479 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 AC106754.2-201ENST00000623006 233 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 AP000770.2-201ENST00000623694 100 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 MTND4P12-201ENST00000498999 1377 ntBASIC0.72□□□□□ -2.29
BRCA1P38398 RNY3P3-201ENST00000363816 102 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 SNORD114-24-201ENST00000365029 72 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 ZNF885P-201ENST00000420174 1098 ntBASIC0.71□□□□□ -2.3
BRCA1P38398 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms