Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CTNNA1P35221 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 MIR660-201ENST00000385235 97 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 SNORD65B-201ENST00000459126 73 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 AC026782.1-201ENST00000512952 449 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 Y_RNA.682-201ENST00000516457 100 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 AC073413.2-201ENST00000604332 360 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
CTNNA1P35221 AC027514.1-201ENST00000588561 1603 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 RNU4-76P-201ENST00000364509 141 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 SNORA70.7-201ENST00000384159 133 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 Y_RNA.505-201ENST00000384489 102 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 MIR222-201ENST00000384992 110 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 AC069439.1-201ENST00000494739 167 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 AC010469.2-201ENST00000496412 480 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 AC108210.2-201ENST00000503681 201 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 RNU6-922P-201ENST00000516753 99 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.3□□□□□ -2.2
CTNNA1P35221 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.3□□□□□ -2.2
CTNNA1P35221 AL022345.2-201ENST00000606307 135 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 SNORA28-201ENST00000606769 126 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 BX284668.6-201ENST00000606899 438 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 AL050343.2-201ENST00000607338 280 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 AL133216.2-202ENST00000634512 349 ntBASIC1.3□□□□□ -2.2
CTNNA1P35221 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.29□□□□□ -2.2
CTNNA1P35221 RNU6-222P-201ENST00000362438 107 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 Y_RNA.339-201ENST00000365325 102 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CTNNA1P35221 RNU11-5P-201ENST00000391216 129 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 SNORA11.2-201ENST00000408318 127 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 AC010598.1-201ENST00000510378 103 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 AC046134.1-201ENST00000514454 666 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 RNA5SP404-201ENST00000517118 132 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 AC105029.1-201ENST00000520250 669 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 CBX3P8-201ENST00000532412 525 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.29□□□□□ -2.2
CTNNA1P35221 AC093023.1-201ENST00000547375 507 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 AL121579.1-201ENST00000555129 305 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.29□□□□□ -2.2
CTNNA1P35221 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 AC098679.4-201ENST00000624241 654 ntBASIC1.29□□□□□ -2.2
CTNNA1P35221 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CTNNA1P35221 RNU1-22P-201ENST00000363334 158 ntBASIC1.28□□□□□ -2.2
CTNNA1P35221 MIR548F5-201ENST00000408421 86 ntBASIC1.28□□□□□ -2.2
CTNNA1P35221 AC074085.1-201ENST00000413598 418 ntBASIC1.28□□□□□ -2.2
CTNNA1P35221 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.28□□□□□ -2.2
CTNNA1P35221 RPS3AP52-201ENST00000435639 297 ntBASIC1.28□□□□□ -2.2
CTNNA1P35221 HSPE1P13-201ENST00000451143 297 ntBASIC1.28□□□□□ -2.2
CTNNA1P35221 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.28□□□□□ -2.2
CTNNA1P35221 AC097462.1-201ENST00000514125 324 ntBASIC1.28□□□□□ -2.2
CTNNA1P35221 AL513534.2-201ENST00000603836 250 ntBASIC1.28□□□□□ -2.2
CTNNA1P35221 AC005014.2-201ENST00000607795 599 ntBASIC1.28□□□□□ -2.2
CTNNA1P35221 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CTNNA1P35221 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
CTNNA1P35221 Y_RNA.166-201ENST00000363730 102 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 Y_RNA.594-201ENST00000410373 140 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 RAB28P5-201ENST00000427490 651 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 DYNLT3P2-201ENST00000442517 295 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 AC107399.1-201ENST00000451226 265 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 AC116353.2-201ENST00000505332 712 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 AC018710.1-201ENST00000506509 158 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.27□□□□□ -2.21
CTNNA1P35221 MIR4778-201ENST00000577635 80 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 MIR4421-201ENST00000578133 69 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 AC011712.1-201ENST00000588959 234 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 AC084782.3-201ENST00000612282 578 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 U6atac.1-201ENST00000616025 117 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 AC005858.4-201ENST00000623191 700 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 MIR6079-201ENST00000635807 62 ntBASIC1.27□□□□□ -2.21
CTNNA1P35221 RNA5SP99-201ENST00000364020 114 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 RNU6-281P-201ENST00000384212 103 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 Y_RNA.482-201ENST00000384377 111 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 RNU4-62P-201ENST00000410125 130 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 MTCO3P19-201ENST00000415864 321 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 OR2A41P-201ENST00000473586 105 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 Y_RNA.708-201ENST00000516950 96 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 RNU7-172P-201ENST00000517125 64 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 CYCSP23-201ENST00000519781 313 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 AC090617.3-201ENST00000573670 475 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 AC092794.1-201ENST00000612734 582 ntBASIC1.26□□□□□ -2.21
CTNNA1P35221 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CTNNA1P35221 RNU6-199P-201ENST00000362954 107 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 Y_RNA.265-201ENST00000364677 108 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 Y_RNA.279-201ENST00000364763 95 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 RNU6-601P-201ENST00000384540 107 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 MIR190B-201ENST00000401119 79 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 RNU6-1050P-201ENST00000410388 107 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 RNU6-1001P-201ENST00000411265 100 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.25□□□□□ -2.21
CTNNA1P35221 MTCYBP10-201ENST00000424905 650 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 EIF1P2-201ENST00000428233 350 ntBASIC1.25□□□□□ -2.21
CTNNA1P35221 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.25□□□□□ -2.21
CTNNA1P35221 UQCRBP2-201ENST00000447827 297 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms