Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU1-23P-201ENST00000363361 144 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 MIR27B-201ENST00000385129 97 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 RNU2-64P-201ENST00000411315 191 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 AL139156.1-201ENST00000412785 841 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.61□□□□□ -1.99
SLC6A4P31645 AC008134.1-201ENST00000420943 193 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.61□□□□□ -1.99
SLC6A4P31645 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.61□□□□□ -1.99
SLC6A4P31645 HMGN2P18-201ENST00000450680 270 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 AL137159.1-201ENST00000452808 512 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 RNU6-138P-201ENST00000515952 107 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 RNU6-965P-201ENST00000516721 96 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 RPL21P9-201ENST00000556149 474 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 AC009127.3-201ENST00000570531 403 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 MIR4282-201ENST00000583613 67 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 DEFB117-201ENST00000602356 141 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 MIR1248-201ENST00000629190 106 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 U6.115-201ENST00000636045 103 ntBASIC2.61□□□□□ -1.99
SLC6A4P31645 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
SLC6A4P31645 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.61□□□□□ -1.99
SLC6A4P31645 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SLC6A4P31645 Y_RNA.122-201ENST00000363331 96 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 Y_RNA.217-201ENST00000364214 105 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 RNU6-1289P-201ENST00000384431 106 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 SNORA67.4-201ENST00000384688 142 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 AC009310.1-201ENST00000414414 451 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 AL138752.1-201ENST00000452964 351 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 SNORD2.1-201ENST00000458762 69 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 Y_RNA.641-201ENST00000459414 105 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.6□□□□□ -1.99
SLC6A4P31645 RNA5SP24-201ENST00000516478 95 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 AC073349.3-201ENST00000617616 186 ntBASIC2.6□□□□□ -1.99
SLC6A4P31645 RNU6-271P-201ENST00000363858 105 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 MIR504-201ENST00000385065 83 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 MIR1298-201ENST00000408783 112 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 RNU2-14P-201ENST00000411053 191 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 RNA5SP492-201ENST00000411330 114 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 AL357134.1-201ENST00000445848 426 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 Y_RNA.638-201ENST00000459374 113 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.59□□□□□ -1.99
SLC6A4P31645 RNU1-41P-201ENST00000516161 162 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 RNU1-48P-201ENST00000516400 162 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 RNU6-182P-201ENST00000516970 105 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 AC130289.1-201ENST00000577321 73 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 MIR4643-201ENST00000577473 78 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 MIR3145-201ENST00000580727 82 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC6A4P31645 MIR7843-201ENST00000622274 79 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 AC006435.5-201ENST00000624486 112 ntBASIC2.59□□□□□ -1.99
SLC6A4P31645 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC6A4P31645 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC6A4P31645 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC6A4P31645 Y_RNA.29-201ENST00000362570 113 ntBASIC2.58□□□□□ -2
SLC6A4P31645 Y_RNA.83-201ENST00000363005 113 ntBASIC2.58□□□□□ -2
SLC6A4P31645 Y_RNA.332-201ENST00000365271 113 ntBASIC2.58□□□□□ -2
SLC6A4P31645 SNORA40.19-201ENST00000390846 128 ntBASIC2.58□□□□□ -2
SLC6A4P31645 RNU6-57P-201ENST00000411348 103 ntBASIC2.58□□□□□ -2
SLC6A4P31645 AC123900.1-201ENST00000420390 96 ntBASIC2.58□□□□□ -2
SLC6A4P31645 AC010154.1-201ENST00000425857 269 ntBASIC2.58□□□□□ -2
SLC6A4P31645 AC093259.1-201ENST00000509755 300 ntBASIC2.58□□□□□ -2
SLC6A4P31645 AC010598.1-201ENST00000510378 103 ntBASIC2.58□□□□□ -2
SLC6A4P31645 AC008413.1-201ENST00000511864 177 ntBASIC2.58□□□□□ -2
SLC6A4P31645 AP005660.1-201ENST00000522972 293 ntBASIC2.58□□□□□ -2
SLC6A4P31645 U4.3-201ENST00000621047 82 ntBASIC2.58□□□□□ -2
SLC6A4P31645 AC064859.1-201ENST00000624741 174 ntBASIC2.58□□□□□ -2
SLC6A4P31645 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.58□□□□□ -2
SLC6A4P31645 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SLC6A4P31645 Y_RNA.76-201ENST00000362931 109 ntBASIC2.57□□□□□ -2
SLC6A4P31645 Y_RNA.199-201ENST00000364014 102 ntBASIC2.57□□□□□ -2
SLC6A4P31645 Y_RNA.292-201ENST00000364904 97 ntBASIC2.57□□□□□ -2
SLC6A4P31645 Y_RNA.297-201ENST00000364950 91 ntBASIC2.57□□□□□ -2
SLC6A4P31645 MIR592-201ENST00000384959 97 ntBASIC2.57□□□□□ -2
SLC6A4P31645 MIR873-201ENST00000401120 77 ntBASIC2.57□□□□□ -2
SLC6A4P31645 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.57□□□□□ -2
SLC6A4P31645 SRIP3-201ENST00000413200 219 ntBASIC2.57□□□□□ -2
SLC6A4P31645 snoU13.26-201ENST00000459452 105 ntBASIC2.57□□□□□ -2
SLC6A4P31645 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.57□□□□□ -2
SLC6A4P31645 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
SLC6A4P31645 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
SLC6A4P31645 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.57□□□□□ -2
SLC6A4P31645 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.57□□□□□ -2
SLC6A4P31645 AC098479.1-201ENST00000609225 154 ntBASIC2.57□□□□□ -2
SLC6A4P31645 AL078604.3-201ENST00000615580 211 ntBASIC2.57□□□□□ -2
SLC6A4P31645 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SLC6A4P31645 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.57□□□□□ -2
SLC6A4P31645 RNU6-1272P-201ENST00000362776 107 ntBASIC2.56□□□□□ -2
SLC6A4P31645 RNA5SP125-201ENST00000364843 120 ntBASIC2.56□□□□□ -2
SLC6A4P31645 RNY4P28-201ENST00000365281 93 ntBASIC2.56□□□□□ -2
SLC6A4P31645 RNU6-662P-201ENST00000384253 104 ntBASIC2.56□□□□□ -2
SLC6A4P31645 RNU2-48P-201ENST00000410694 191 ntBASIC2.56□□□□□ -2
SLC6A4P31645 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A4P31645 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A4P31645 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
SLC6A4P31645 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A4P31645 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
SLC6A4P31645 SNORA81.3-201ENST00000517283 198 ntBASIC2.56□□□□□ -2
SLC6A4P31645 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A4P31645 SNORD53-201ENST00000579969 78 ntBASIC2.56□□□□□ -2
SLC6A4P31645 MIR4524B-201ENST00000581569 115 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms