Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU6-125P-201ENST00000384505 107 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HOXC12P31275 MIR1253-201ENST00000408273 105 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 SNORA36B-201ENST00000410438 131 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 RPS27AP9-201ENST00000477681 438 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 AC018868.1-201ENST00000491307 315 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXC12P31275 RN7SKP164-201ENST00000516138 266 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 Y_RNA.703-201ENST00000516846 111 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 MIR4738-201ENST00000579134 87 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 MIR4724-201ENST00000579485 89 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 AC090616.3-201ENST00000582184 217 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 POLR3GP1-201ENST00000594073 261 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 AL365361.1-201ENST00000566942 3481 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HOXC12P31275 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HOXC12P31275 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC12P31275 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC12P31275 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXC12P31275 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC12P31275 SNORA25B-201ENST00000365507 128 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 RNU6-136P-201ENST00000384663 107 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 MIR592-201ENST00000384959 97 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 RNA5SP511-201ENST00000410487 115 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 RN7SKP284-201ENST00000411002 343 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 AC010154.1-201ENST00000425857 269 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 CR769767.1-201ENST00000436337 346 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 AL392103.1-201ENST00000447000 198 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXC12P31275 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXC12P31275 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXC12P31275 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXC12P31275 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.93□□□□□ -1.94
HOXC12P31275 MIR4744-201ENST00000581563 82 ntBASIC2.93□□□□□ -1.94
HOXC12P31275 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXC12P31275 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXC12P31275 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXC12P31275 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXC12P31275 CENPCP1-201ENST00000533085 2578 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 MIR367-201ENST00000362299 68 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 Y_RNA.75-201ENST00000362927 97 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 Y_RNA.357-201ENST00000365487 109 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 RNU6-1323P-201ENST00000384025 107 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 Y_RNA.441-201ENST00000384123 112 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 MIR526A2-201ENST00000390198 65 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 RNA5SP293-201ENST00000410527 113 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 RNU6-383P-201ENST00000410864 94 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 RNU4-47P-201ENST00000410876 114 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC12P31275 RNA5SP341-201ENST00000516261 117 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 MTND5P41-201ENST00000517498 206 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 AP003357.1-201ENST00000604497 148 ntBASIC2.92□□□□□ -1.94
HOXC12P31275 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXC12P31275 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXC12P31275 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HOXC12P31275 RNU6-103P-201ENST00000363686 107 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 RNU4-13P-201ENST00000364019 141 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 Y_RNA.398-201ENST00000383952 99 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 RNU5E-9P-201ENST00000411164 104 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 AL135786.1-201ENST00000415892 214 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 SEPT7P4-201ENST00000437076 306 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC12P31275 AC245047.8-201ENST00000456455 284 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 RPL36AP21-201ENST00000490372 323 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 RNU6-453P-201ENST00000516819 85 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 RNU7-116P-201ENST00000516940 62 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 RNU6-856P-201ENST00000516959 98 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 RNU6-789P-201ENST00000517105 102 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 MIR4438-201ENST00000585271 93 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 AC108706.1-201ENST00000611053 297 ntBASIC2.91□□□□□ -1.94
HOXC12P31275 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC12P31275 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HOXC12P31275 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.9□□□□□ -1.94
HOXC12P31275 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.9□□□□□ -1.94
HOXC12P31275 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.9□□□□□ -1.94
HOXC12P31275 MIR340-201ENST00000362125 95 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 Y_RNA.23-201ENST00000362496 106 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 Y_RNA.272-201ENST00000364696 102 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 RNU6-275P-201ENST00000364910 107 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC12P31275 RNU6-301P-201ENST00000384277 107 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 RNU6-578P-201ENST00000390980 103 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 AC060773.1-201ENST00000421698 310 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 CST9LP2-201ENST00000437612 320 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 AC009238.1-201ENST00000442165 424 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 AC009237.6-201ENST00000446969 424 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 RPL23AP54-201ENST00000495129 419 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC12P31275 SCARNA8-201ENST00000515924 131 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 RNU6-346P-201ENST00000516288 111 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 RNU6-1007P-201ENST00000516586 107 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC12P31275 MIR5688-201ENST00000580619 83 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 uc_338.1-201ENST00000612113 180 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 U2.20-201ENST00000613956 192 ntBASIC2.9□□□□□ -1.95
HOXC12P31275 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC12P31275 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC12P31275 MIR422A-201ENST00000362286 90 ntBASIC2.89□□□□□ -1.95
HOXC12P31275 RNU6-805P-201ENST00000365643 106 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms