Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA13P31271 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXA13P31271 AC131281.1-201ENST00000522984 164 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 MZT1P2-201ENST00000604387 248 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA13P31271 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA13P31271 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 AL159152.1-201ENST00000635019 2587 ntBASIC2.05□□□□□ -2.08
HOXA13P31271 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
HOXA13P31271 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HOXA13P31271 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
HOXA13P31271 Y_RNA.210-201ENST00000364161 110 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 RNU6-793P-201ENST00000384233 104 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 AL627390.1-201ENST00000396055 340 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 RNU6-101P-201ENST00000410323 104 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 RNA5SP504-201ENST00000410676 117 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA13P31271 AC096920.1-201ENST00000423991 241 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA13P31271 AC091179.3-201ENST00000474761 144 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.04□□□□□ -2.08
HOXA13P31271 AC107393.1-201ENST00000512403 346 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 RNU6-948P-201ENST00000516374 107 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 RNU6-344P-201ENST00000516635 111 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 RNU6-107P-201ENST00000516643 102 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 SUMO2P18-201ENST00000518873 252 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 AC010999.1-201ENST00000611856 324 ntBASIC2.04□□□□□ -2.08
HOXA13P31271 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
HOXA13P31271 AC008555.8-201ENST00000623602 2168 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HOXA13P31271 SNORD87-201ENST00000364849 89 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 AC117470.1-201ENST00000381974 330 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 Y_RNA.424-201ENST00000384063 103 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 Y_RNA.458-201ENST00000384240 102 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 MIR329-1-201ENST00000385028 80 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 RNU6-482P-201ENST00000391068 107 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 RNU6-121P-201ENST00000410525 99 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HOXA13P31271 ELOCP20-201ENST00000422460 345 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXA13P31271 RNU7-57P-201ENST00000459540 60 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 MRPS35P2-201ENST00000508242 191 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXA13P31271 AL117187.1-201ENST00000555482 181 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXA13P31271 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.03□□□□□ -2.08
HOXA13P31271 Y_RNA.27-201ENST00000362540 103 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 RNU1-62P-201ENST00000362599 164 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 Y_RNA.471-201ENST00000384312 102 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 RNY3P4-201ENST00000384428 101 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 MIR586-201ENST00000385035 97 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 RNU6-57P-201ENST00000411348 103 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HOXA13P31271 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXA13P31271 MTND3P2-201ENST00000438452 342 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 HMGN2P9-201ENST00000476875 229 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 RNU6-911P-201ENST00000516523 104 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 RNU6-1012P-201ENST00000516606 109 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 RNU6-250P-201ENST00000516958 103 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 AC022616.4-201ENST00000522985 181 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 AC087441.2-201ENST00000529141 262 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 AK6P2-201ENST00000549020 471 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 AC055872.1-201ENST00000570978 278 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 AC136932.1-201ENST00000574771 208 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 MIR3169-201ENST00000578032 83 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 SDR42E1P4-201ENST00000620894 481 ntBASIC2.02□□□□□ -2.09
HOXA13P31271 RNU6-961P-201ENST00000363893 105 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 Y_RNA.214-201ENST00000364201 112 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 Y_RNA.222-201ENST00000364264 102 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 Y_RNA.415-201ENST00000384012 112 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 RNU6-975P-201ENST00000384296 105 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HOXA13P31271 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HOXA13P31271 RPL21P1-201ENST00000399532 476 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 MIR1252-201ENST00000408861 65 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 SNORD12B-201ENST00000410433 91 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 RNA5SP501-201ENST00000410990 112 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 RPL21P38-201ENST00000418090 167 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 MTCO1P44-201ENST00000441935 243 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 AL357134.1-201ENST00000445848 426 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 RNU1-131P-201ENST00000458943 161 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 RPL26P26-201ENST00000480251 434 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 AC067942.3-201ENST00000512025 362 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 RNU6-1041P-201ENST00000516254 102 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 RNU6-966P-201ENST00000516479 104 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 SNORA25.15-201ENST00000516487 89 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 RNU6-635P-201ENST00000516651 102 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 AP002001.1-203ENST00000534002 267 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 AC008269.2-201ENST00000561915 1105 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 AL390123.1-201ENST00000603216 237 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 AC006001.4-201ENST00000622243 395 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 AC068205.3-201ENST00000636385 468 ntBASIC2.01□□□□□ -2.09
HOXA13P31271 MIR340-201ENST00000362125 95 ntBASIC2□□□□□ -2.09
HOXA13P31271 RNU6-238P-201ENST00000363313 106 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 473.9 ms