Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 U2.20-201ENST00000613956 192 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.9-201ENST00000615427 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.11-201ENST00000616345 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.2-201ENST00000616535 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.3-201ENST00000617785 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.19-201ENST00000618602 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 RNU2-1-201ENST00000618664 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.6-201ENST00000619225 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.5-201ENST00000619465 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 U2.10-201ENST00000620268 191 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.34□□□□□ -2.03
HOXA11P31270 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
HOXA11P31270 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
HOXA11P31270 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXA11P31270 SNORA67.2-201ENST00000384300 149 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 SNORA46.1-201ENST00000391069 153 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 SNORA53-201ENST00000391141 249 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AL033519.2-201ENST00000403958 392 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AC004866.1-201ENST00000411748 78 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 RAB28P5-201ENST00000427490 651 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 NDUFB4P10-201ENST00000452541 359 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 COX6CP14-201ENST00000469580 174 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AC140059.1-201ENST00000489238 361 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXA11P31270 DEFB131C-201ENST00000528817 165 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 RRN3P3-201ENST00000549207 578 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AC055872.1-201ENST00000570978 278 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AC130289.1-201ENST00000577321 73 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AC007229.1-201ENST00000590455 412 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 AC005176.2-201ENST00000596933 147 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 TCL6_2.1-201ENST00000615162 119 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 MIR6132-201ENST00000622083 109 ntBASIC2.33□□□□□ -2.04
HOXA11P31270 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXA11P31270 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXA11P31270 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HOXA11P31270 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.44-201ENST00000362676 108 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.82-201ENST00000363000 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.92-201ENST00000363043 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 SNORD27-201ENST00000363981 72 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.235-201ENST00000364412 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 SNORD32B-201ENST00000364460 84 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.306-201ENST00000365015 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.312-201ENST00000365089 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.322-201ENST00000365151 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.569-201ENST00000384749 103 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 RNU4-30P-201ENST00000410245 143 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 RNA5SP504-201ENST00000410676 117 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 RNU6-1199P-201ENST00000411249 104 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 RPL23AP36-201ENST00000413895 458 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.32□□□□□ -2.04
HOXA11P31270 HMGN2P3-201ENST00000433603 273 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 HMGN2P5-201ENST00000436882 273 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 AL161788.1-201ENST00000441805 169 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 AC009237.7-201ENST00000447357 229 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 AC005042.3-201ENST00000453230 174 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.650-201ENST00000459002 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 RNU6-625P-201ENST00000459412 107 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 AC145146.1-201ENST00000496370 254 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 RNU7-110P-201ENST00000516891 62 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.777-201ENST00000516982 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.771-201ENST00000598668 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 AC005562.2-201ENST00000618264 111 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 Y_RNA.789-201ENST00000622480 102 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 AC008873.1-201ENST00000625051 138 ntBASIC2.32□□□□□ -2.04
HOXA11P31270 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HOXA11P31270 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA11P31270 AC092881.1-201ENST00000638218 2733 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 Y_RNA.269-201ENST00000364685 89 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 Y_RNA.275-201ENST00000364726 110 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 Y_RNA.277-201ENST00000364754 102 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 Y_RNA.418-201ENST00000384029 102 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 RNU6-1310P-201ENST00000384153 107 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 RNU6-21P-201ENST00000384710 107 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXA11P31270 UQCRBP2-201ENST00000447827 297 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 AC090515.1-201ENST00000465295 476 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 AP002001.1-203ENST00000534002 267 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 AC008749.1-201ENST00000597650 306 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 AC011921.3-201ENST00000605540 361 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.31□□□□□ -2.04
HOXA11P31270 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXA11P31270 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXA11P31270 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXA11P31270 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXA11P31270 RNU1-72P-201ENST00000362976 153 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 RNU6-1264P-201ENST00000383891 107 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 RNU4-70P-201ENST00000384579 139 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 Y_RNA.555-201ENST00000384673 110 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 MIR561-201ENST00000385216 97 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HOXA11P31270 RNU2-54P-201ENST00000410299 190 ntBASIC2.3□□□□□ -2.04
HOXA11P31270 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXA11P31270 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms