Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC016597.2-201ENST00000613256 341 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AL138726.1-201ENST00000614873 333 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AC006435.5-201ENST00000624486 112 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 AL008636.1-201ENST00000625038 1018 ntBASIC0.18□□□□□ -2.38
CD40LGP29965 RNU6-996P-201ENST00000365438 107 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 RNU6-1297P-201ENST00000384415 104 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 MIR32-201ENST00000384965 70 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 AL390237.1-201ENST00000404226 1415 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 RNA5SP193-201ENST00000410353 107 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 MTCO3P19-201ENST00000415864 321 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.17□□□□□ -2.38
CD40LGP29965 Z98949.2-201ENST00000440996 144 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 MTCO2P18-201ENST00000457151 658 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 RNU7-125P-201ENST00000458760 62 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 MTND3P3-201ENST00000505004 126 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 AC010598.1-201ENST00000510378 103 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 RNU6-189P-201ENST00000516120 101 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 AP002004.2-201ENST00000531656 154 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 RPL21P9-201ENST00000556149 474 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 RN7SL793P-201ENST00000583259 296 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 MIR4424-201ENST00000585257 86 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 AC017083.3-201ENST00000609955 700 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 AC103705.1-201ENST00000619013 241 ntBASIC0.17□□□□□ -2.38
CD40LGP29965 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CD40LGP29965 RNU6-833P-201ENST00000363486 107 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 Y_RNA.159-201ENST00000363674 87 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 RNU6-873P-201ENST00000363833 107 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 MIR140-201ENST00000385282 100 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 SNORD105-201ENST00000386910 85 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 MIR891A-201ENST00000401237 79 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 AL606923.1-201ENST00000406616 190 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 Z82188.1-201ENST00000436709 154 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 TPTE2P5-203ENST00000458118 728 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 AC091179.3-201ENST00000474761 144 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 Y_RNA.673-201ENST00000516306 88 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 RNU6-1291P-201ENST00000516591 104 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 RNU6-759P-201ENST00000516740 103 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.16□□□□□ -2.38
CD40LGP29965 AF235103.2-201ENST00000525753 346 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
CD40LGP29965 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.16□□□□□ -2.38
CD40LGP29965 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.16□□□□□ -2.38
CD40LGP29965 MIR3913-1-201ENST00000577744 102 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 MIR5692C1-201ENST00000585309 91 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 AL357078.3-201ENST00000607528 618 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 AL121757.2-201ENST00000611223 313 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 AF246928.1-201ENST00000623768 87 ntBASIC0.16□□□□□ -2.38
CD40LGP29965 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
CD40LGP29965 RNU4-21P-201ENST00000362802 126 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 SNORD50.1-201ENST00000362987 71 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNU6-553P-201ENST00000364047 96 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNY3P9-201ENST00000384727 106 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 MIR562-201ENST00000384894 95 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 SNORD111-201ENST00000408139 94 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNU6-994P-201ENST00000410507 111 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 ZNF885P-201ENST00000420174 1098 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 AL358934.1-201ENST00000432346 324 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.15□□□□□ -2.39
CD40LGP29965 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.15□□□□□ -2.39
CD40LGP29965 RNU7-63P-201ENST00000459054 62 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 MTCO3P38-201ENST00000468910 766 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNU7-41P-201ENST00000515917 61 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNA5SP436-201ENST00000516020 115 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNU6-1038P-201ENST00000516516 104 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNU6-232P-201ENST00000517144 64 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 AC011712.1-201ENST00000588959 234 ntBASIC0.15□□□□□ -2.39
CD40LGP29965 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 Y_RNA.201-201ENST00000364052 96 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 RNU4-41P-201ENST00000364426 143 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 Y_RNA.319-201ENST00000365138 92 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 Y_RNA.393-201ENST00000383936 102 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 RNY1P4-201ENST00000384595 115 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 AL590002.1-201ENST00000406554 418 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 RNA5SP511-201ENST00000410487 115 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 RNU6-177P-201ENST00000411257 104 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.14□□□□□ -2.39
CD40LGP29965 AL359672.1-201ENST00000442302 409 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 RN7SKP164-201ENST00000516138 266 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 RNU6-1198P-201ENST00000516904 67 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 AC091144.1-201ENST00000519573 138 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 AC010620.1-201ENST00000601088 1102 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 AC092747.3-201ENST00000603769 301 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 AC007684.1-201ENST00000609671 477 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 AL354950.2-201ENST00000617939 290 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 AL158209.2-201ENST00000619266 216 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 AC079248.2-201ENST00000623779 326 ntBASIC0.14□□□□□ -2.39
CD40LGP29965 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
CD40LGP29965 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
CD40LGP29965 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CD40LGP29965 Y_RNA.184-201ENST00000363884 108 ntBASIC0.13□□□□□ -2.39
CD40LGP29965 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
CD40LGP29965 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
CD40LGP29965 MIR1827-201ENST00000408549 66 ntBASIC0.13□□□□□ -2.39
CD40LGP29965 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.13□□□□□ -2.39
CD40LGP29965 PIGPP3-201ENST00000425307 415 ntBASIC0.13□□□□□ -2.39
CD40LGP29965 MRPS10P2-201ENST00000431226 381 ntBASIC0.13□□□□□ -2.39
CD40LGP29965 MTCO2P16-201ENST00000436962 677 ntBASIC0.13□□□□□ -2.39
CD40LGP29965 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms