Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC233266.1-201ENST00000454518 96 ntBASIC3.88□□□□□ -1.79
VARSP26640 RN7SL330P-201ENST00000469709 307 ntBASIC3.88□□□□□ -1.79
VARSP26640 RNU2-34P-201ENST00000516534 121 ntBASIC3.88□□□□□ -1.79
VARSP26640 RN7SKP282-201ENST00000516824 299 ntBASIC3.88□□□□□ -1.79
VARSP26640 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.88□□□□□ -1.79
VARSP26640 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.88□□□□□ -1.79
VARSP26640 MIR5197-201ENST00000583721 112 ntBASIC3.88□□□□□ -1.79
VARSP26640 AC008507.4-201ENST00000585464 127 ntBASIC3.88□□□□□ -1.79
VARSP26640 AL606490.9-201ENST00000603331 271 ntBASIC3.88□□□□□ -1.79
VARSP26640 AC022217.4-201ENST00000604389 163 ntBASIC3.88□□□□□ -1.79
VARSP26640 AC090115.4-201ENST00000609970 188 ntBASIC3.88□□□□□ -1.79
VARSP26640 MIR6868-201ENST00000611215 58 ntBASIC3.88□□□□□ -1.79
VARSP26640 AC242852.1-201ENST00000612151 96 ntBASIC3.88□□□□□ -1.79
VARSP26640 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.88□□□□□ -1.79
VARSP26640 AC244015.1-201ENST00000622301 99 ntBASIC3.88□□□□□ -1.79
VARSP26640 AC244205.2-202ENST00000635781 342 ntBASIC3.88□□□□□ -1.79
VARSP26640 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.88□□□□□ -1.79
VARSP26640 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VARSP26640 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VARSP26640 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VARSP26640 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.87□□□□□ -1.79
VARSP26640 IPO8P1-201ENST00000455509 3109 ntBASIC3.87□□□□□ -1.79
VARSP26640 Y_RNA.93-201ENST00000363066 109 ntBASIC3.87□□□□□ -1.79
VARSP26640 SNORD46.1-201ENST00000364139 104 ntBASIC3.87□□□□□ -1.79
VARSP26640 Y_RNA.253-201ENST00000364562 112 ntBASIC3.87□□□□□ -1.79
VARSP26640 RNA5SP252-201ENST00000391131 119 ntBASIC3.87□□□□□ -1.79
VARSP26640 RPL23AP83-201ENST00000434984 473 ntBASIC3.87□□□□□ -1.79
VARSP26640 MRPS36P2-201ENST00000512569 299 ntBASIC3.87□□□□□ -1.79
VARSP26640 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.87□□□□□ -1.79
VARSP26640 MIR5685-201ENST00000579080 79 ntBASIC3.87□□□□□ -1.79
VARSP26640 AC073413.2-201ENST00000604332 360 ntBASIC3.87□□□□□ -1.79
VARSP26640 AC025521.1-201ENST00000621624 286 ntBASIC3.87□□□□□ -1.79
VARSP26640 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VARSP26640 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VARSP26640 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VARSP26640 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VARSP26640 Y_RNA.107-201ENST00000363190 121 ntBASIC3.86□□□□□ -1.79
VARSP26640 SNORA14A-201ENST00000364773 135 ntBASIC3.86□□□□□ -1.79
VARSP26640 MIR518F-201ENST00000384973 87 ntBASIC3.86□□□□□ -1.79
VARSP26640 RNU1-101P-201ENST00000391171 127 ntBASIC3.86□□□□□ -1.79
VARSP26640 MIR1253-201ENST00000408273 105 ntBASIC3.86□□□□□ -1.79
VARSP26640 MIR1251-201ENST00000408552 70 ntBASIC3.86□□□□□ -1.79
VARSP26640 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.86□□□□□ -1.79
VARSP26640 AL031183.1-201ENST00000457667 207 ntBASIC3.86□□□□□ -1.79
VARSP26640 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.86□□□□□ -1.79
VARSP26640 RNU6-965P-201ENST00000516721 96 ntBASIC3.86□□□□□ -1.79
VARSP26640 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
VARSP26640 SNORA31.21-201ENST00000517180 77 ntBASIC3.86□□□□□ -1.79
VARSP26640 SUMO2P16-201ENST00000519475 264 ntBASIC3.86□□□□□ -1.79
VARSP26640 MIR5047-201ENST00000579212 100 ntBASIC3.86□□□□□ -1.79
VARSP26640 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VARSP26640 AC021443.1-201ENST00000604478 211 ntBASIC3.86□□□□□ -1.79
VARSP26640 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VARSP26640 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.86□□□□□ -1.79
VARSP26640 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
VARSP26640 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
VARSP26640 RNA5SP399-201ENST00000364003 117 ntBASIC3.85□□□□□ -1.79
VARSP26640 SNORA70.4-201ENST00000365509 134 ntBASIC3.85□□□□□ -1.79
VARSP26640 AC025750.2-201ENST00000442609 450 ntBASIC3.85□□□□□ -1.79
VARSP26640 HMGN2P18-201ENST00000450680 270 ntBASIC3.85□□□□□ -1.79
VARSP26640 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.85□□□□□ -1.79
VARSP26640 RNA5SP112-201ENST00000515937 99 ntBASIC3.85□□□□□ -1.79
VARSP26640 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.85□□□□□ -1.79
VARSP26640 SNORA51-201ENST00000606420 132 ntBASIC3.85□□□□□ -1.79
VARSP26640 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.85□□□□□ -1.79
VARSP26640 CR392039.5-201ENST00000623201 510 ntBASIC3.85□□□□□ -1.79
VARSP26640 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VARSP26640 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.85□□□□□ -1.79
VARSP26640 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VARSP26640 MAPK10-373ENST00000641983 6772 ntBASIC3.84□□□□□ -1.79
VARSP26640 RNU6-525P-201ENST00000363685 104 ntBASIC3.84□□□□□ -1.79
VARSP26640 Y_RNA.298-201ENST00000364960 107 ntBASIC3.84□□□□□ -1.79
VARSP26640 SNORA2.2-201ENST00000365473 135 ntBASIC3.84□□□□□ -1.79
VARSP26640 U8.17-201ENST00000391292 132 ntBASIC3.84□□□□□ -1.79
VARSP26640 RN7SKP156-201ENST00000410308 342 ntBASIC3.84□□□□□ -1.79
VARSP26640 AC026726.1-201ENST00000512859 601 ntBASIC3.84□□□□□ -1.79
VARSP26640 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.84□□□□□ -1.79
VARSP26640 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VARSP26640 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.84□□□□□ -1.79
VARSP26640 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VARSP26640 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
VARSP26640 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
VARSP26640 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VARSP26640 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
VARSP26640 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VARSP26640 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VARSP26640 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.83□□□□□ -1.8
VARSP26640 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.83□□□□□ -1.8
VARSP26640 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VARSP26640 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
VARSP26640 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VARSP26640 AP003122.5-201ENST00000527668 3766 ntBASIC3.83□□□□□ -1.8
VARSP26640 MIR548D2-201ENST00000384955 97 ntBASIC3.83□□□□□ -1.8
VARSP26640 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VARSP26640 RNU6-1186P-201ENST00000410429 97 ntBASIC3.83□□□□□ -1.8
VARSP26640 RNA5SP225-201ENST00000410874 135 ntBASIC3.83□□□□□ -1.8
VARSP26640 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.83□□□□□ -1.8
VARSP26640 RPL39P25-201ENST00000449384 154 ntBASIC3.83□□□□□ -1.8
VARSP26640 RNU6-893P-201ENST00000458841 100 ntBASIC3.83□□□□□ -1.8
VARSP26640 RAC1P2-201ENST00000511164 579 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms