Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC130454.1-201ENST00000622948 401 ntBASIC0.83□□□□□ -2.28
COL5A3P25940 BX322639.1-202ENST00000423987 2213 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 RNU6-862P-201ENST00000362804 105 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 Y_RNA.99-201ENST00000363138 105 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 Y_RNA.135-201ENST00000363439 95 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 RNU6-280P-201ENST00000364145 104 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
COL5A3P25940 SNORA75.4-201ENST00000391278 119 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 RPL37P10-201ENST00000412884 288 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AC243428.1-201ENST00000421099 264 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 EIF4EP2-201ENST00000422816 654 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 RPS3AP52-201ENST00000435639 297 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 SNRPEP8-201ENST00000442866 260 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AC079354.2-201ENST00000453523 154 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 MTCO3P8-201ENST00000453691 755 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.82□□□□□ -2.28
COL5A3P25940 AC018710.1-201ENST00000506509 158 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.82□□□□□ -2.28
COL5A3P25940 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.82□□□□□ -2.28
COL5A3P25940 AC067942.3-201ENST00000512025 362 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.82□□□□□ -2.28
COL5A3P25940 AC005899.2-201ENST00000584353 90 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 MZT1P2-201ENST00000604387 248 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AC018462.2-201ENST00000605375 395 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.82□□□□□ -2.28
COL5A3P25940 AC022306.2-201ENST00000617563 647 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.82□□□□□ -2.28
COL5A3P25940 AC073544.1-201ENST00000600110 1595 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 AL159152.1-201ENST00000635019 2587 ntBASIC0.82□□□□□ -2.28
COL5A3P25940 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.81□□□□□ -2.28
COL5A3P25940 Y_RNA.48-201ENST00000362710 103 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 SNORD32B-201ENST00000364460 84 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 SNORD31B-201ENST00000364977 69 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-245P-201ENST00000384020 107 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 MIR487A-201ENST00000385009 80 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNA5SP25-201ENST00000410815 110 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNA5SP501-201ENST00000410990 112 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC123900.1-201ENST00000420390 96 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 USMG5P1-201ENST00000425964 177 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RPL23AP50-201ENST00000434149 455 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC092628.1-201ENST00000436250 252 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.81□□□□□ -2.28
COL5A3P25940 snoU13.6-201ENST00000458785 104 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC010409.1-201ENST00000487382 476 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RPL17P19-201ENST00000489069 552 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC026782.1-201ENST00000512952 449 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.81□□□□□ -2.28
COL5A3P25940 AC093303.1-201ENST00000514549 295 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-58P-201ENST00000517143 103 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.81□□□□□ -2.28
COL5A3P25940 AP003484.1-201ENST00000530974 250 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.81□□□□□ -2.28
COL5A3P25940 AC005668.1-201ENST00000571142 476 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.81□□□□□ -2.28
COL5A3P25940 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.81□□□□□ -2.28
COL5A3P25940 AL355802.3-201ENST00000607571 545 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.81□□□□□ -2.28
COL5A3P25940 PISRT1.1-201ENST00000616930 107 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC092794.2-201ENST00000620933 563 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.81□□□□□ -2.28
COL5A3P25940 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.81□□□□□ -2.28
COL5A3P25940 Y_RNA.88-201ENST00000363029 99 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-595P-201ENST00000363944 107 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-1164P-201ENST00000364428 107 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-281P-201ENST00000384212 103 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 SNORA67.2-201ENST00000384300 149 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 Y_RNA.549-201ENST00000384657 102 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 MIR30A-201ENST00000385092 71 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-876P-201ENST00000391295 104 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL5A3P25940 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
COL5A3P25940 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL5A3P25940 AL356776.1-201ENST00000406574 447 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 MIR320B2-201ENST00000408479 138 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 MIR1283-1-201ENST00000408494 87 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-1050P-201ENST00000410388 107 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU2-7P-201ENST00000410794 178 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU4-14P-201ENST00000410858 122 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-1304P-201ENST00000411374 106 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RPL21P111-201ENST00000418453 477 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AL139396.1-201ENST00000421137 167 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC060773.1-201ENST00000421698 310 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.81□□□□□ -2.28
COL5A3P25940 RBMX2P4-201ENST00000441256 376 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 MTND1P17-201ENST00000448961 204 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AC107399.1-201ENST00000451226 265 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RPL30P10-201ENST00000488148 337 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 RNU6-948P-201ENST00000516374 107 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 APOOP3-201ENST00000536787 586 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.81□□□□□ -2.28
COL5A3P25940 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 MIR4790-201ENST00000577799 79 ntBASIC0.81□□□□□ -2.28
COL5A3P25940 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.81□□□□□ -2.28
COL5A3P25940 SNORD115-8-201ENST00000363856 82 ntBASIC0.8□□□□□ -2.28
COL5A3P25940 RNU6-99P-201ENST00000364721 107 ntBASIC0.8□□□□□ -2.28
COL5A3P25940 SNORD1A-201ENST00000364968 72 ntBASIC0.8□□□□□ -2.28
COL5A3P25940 SNORD115-38-201ENST00000365037 82 ntBASIC0.8□□□□□ -2.28
COL5A3P25940 SNORD81.2-201ENST00000365153 76 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms