Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC136628.3-201ENST00000521868 290 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 AP005660.1-201ENST00000522972 293 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.36□□□□□ -1.87
ERCC3P19447 AC130289.1-201ENST00000577321 73 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 AC068647.2-201ENST00000637380 353 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ERCC3P19447 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
ERCC3P19447 RNU4-13P-201ENST00000364019 141 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 Y_RNA.217-201ENST00000364214 105 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 Y_RNA.287-201ENST00000364853 94 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 RNU6-211P-201ENST00000384047 107 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.35□□□□□ -1.87
ERCC3P19447 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.35□□□□□ -1.87
ERCC3P19447 AC087499.2-201ENST00000432861 149 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 ATP5J2P3-201ENST00000451550 258 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 Y_RNA.641-201ENST00000459414 105 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 RPS29P21-201ENST00000496272 170 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 AC107016.2-201ENST00000547968 190 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 AC079600.2-201ENST00000550076 130 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 AC009779.6-201ENST00000603972 165 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.35□□□□□ -1.87
ERCC3P19447 AC006435.5-201ENST00000624486 112 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 AC009487.2-201ENST00000420969 6821 ntBASIC3.35□□□□□ -1.87
ERCC3P19447 AC096644.4-201ENST00000563417 2912 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ERCC3P19447 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.34□□□□□ -1.87
ERCC3P19447 Y_RNA.83-201ENST00000363005 113 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 Y_RNA.172-201ENST00000363765 102 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 Y_RNA.293-201ENST00000364908 93 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 Y_RNA.456-201ENST00000384232 111 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 RNU2-14P-201ENST00000411053 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 AC010154.1-201ENST00000425857 269 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U8.19-201ENST00000459095 133 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 RNU6-138P-201ENST00000515952 107 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 SUMO2P18-201ENST00000518873 252 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.34□□□□□ -1.87
ERCC3P19447 U2.15-201ENST00000611544 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.16-201ENST00000613119 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.12-201ENST00000613778 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.20-201ENST00000613956 192 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.9-201ENST00000615427 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.11-201ENST00000616345 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.2-201ENST00000616535 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 AC073349.3-201ENST00000617616 186 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.3-201ENST00000617785 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.19-201ENST00000618602 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 RNU2-1-201ENST00000618664 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.6-201ENST00000619225 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.5-201ENST00000619465 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 U2.10-201ENST00000620268 191 ntBASIC3.34□□□□□ -1.87
ERCC3P19447 CENPCP1-201ENST00000533085 2578 ntBASIC3.34□□□□□ -1.88
ERCC3P19447 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
ERCC3P19447 Y_RNA.82-201ENST00000363000 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.92-201ENST00000363043 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 RNU6-801P-201ENST00000364087 105 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 RNA5SP493-201ENST00000364115 91 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.235-201ENST00000364412 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.297-201ENST00000364950 91 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.306-201ENST00000365015 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.312-201ENST00000365089 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.322-201ENST00000365151 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 SNORA9.2-201ENST00000365361 133 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 SNORD116-13-201ENST00000384408 92 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 RNU6-376P-201ENST00000384731 106 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 RNU6-907P-201ENST00000390924 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 RNA5SP323-201ENST00000391094 133 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 RN7SKP284-201ENST00000411002 343 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.33□□□□□ -1.88
ERCC3P19447 UQCRHP3-201ENST00000451503 251 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.650-201ENST00000459002 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 YWHAEP4-201ENST00000505390 198 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.777-201ENST00000516982 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 RNU7-172P-201ENST00000517125 64 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 AC087441.2-201ENST00000529141 262 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.771-201ENST00000598668 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
ERCC3P19447 Y_RNA.789-201ENST00000622480 102 ntBASIC3.33□□□□□ -1.88
ERCC3P19447 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ERCC3P19447 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ERCC3P19447 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ERCC3P19447 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ERCC3P19447 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ERCC3P19447 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ERCC3P19447 snoU2-30.2-201ENST00000362805 70 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 RNU6-200P-201ENST00000364743 107 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 Y_RNA.368-201ENST00000365547 113 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 SNORA26.5-201ENST00000391215 123 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 AC063976.3-201ENST00000426849 329 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 AL135790.2-201ENST00000437701 267 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 RPS20P10-201ENST00000451209 253 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.32□□□□□ -1.88
ERCC3P19447 RNU6-1278P-201ENST00000516130 107 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 RNA5SP76-201ENST00000516277 87 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 AC024405.2-202ENST00000532731 184 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 AL008718.3-201ENST00000610217 321 ntBASIC3.32□□□□□ -1.88
ERCC3P19447 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ERCC3P19447 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ERCC3P19447 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ERCC3P19447 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 SNORD114-7-201ENST00000362520 77 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms