Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 CHEK2P4-201ENST00000450340 246 ntBASIC1.94□□□□□ -2.1
ACTN1P12814 AL050343.2-201ENST00000607338 280 ntBASIC1.94□□□□□ -2.1
ACTN1P12814 U2.1-201ENST00000618978 145 ntBASIC1.94□□□□□ -2.1
ACTN1P12814 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
ACTN1P12814 MTND4P29-201ENST00000503122 1372 ntBASIC1.94□□□□□ -2.1
ACTN1P12814 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ACTN1P12814 RNU1-96P-201ENST00000364163 162 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 SNORD48-201ENST00000364953 64 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 Y_RNA.355-201ENST00000365462 98 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 RNU6-708P-201ENST00000384217 107 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 Y_RNA.496-201ENST00000384444 101 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 SNORA48.1-201ENST00000390879 135 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ACTN1P12814 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 AC016909.1-201ENST00000415916 166 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 AC099677.2-201ENST00000436385 175 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 SNORA40.9-201ENST00000515895 93 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 AC027419.1-201ENST00000522976 328 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 MIR4303-201ENST00000581299 66 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 AC092447.9-201ENST00000603395 144 ntBASIC1.93□□□□□ -2.1
ACTN1P12814 Y_RNA.5-201ENST00000362334 102 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 Y_RNA.61-201ENST00000362835 102 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 SNORA33-201ENST00000363664 130 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 RNU6-417P-201ENST00000384712 107 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 MIR518E-201ENST00000385252 88 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 RNU6-308P-201ENST00000390957 107 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 MIR1185-2-201ENST00000408687 86 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.92□□□□□ -2.1
ACTN1P12814 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.92□□□□□ -2.1
ACTN1P12814 RNU6-625P-201ENST00000459412 107 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 RNU6-221P-201ENST00000459541 99 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 RN7SKP49-201ENST00000516675 260 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 AC025647.1-201ENST00000517879 253 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.92□□□□□ -2.1
ACTN1P12814 AC006600.1-201ENST00000572529 153 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.92□□□□□ -2.1
ACTN1P12814 U1.36-201ENST00000620684 176 ntBASIC1.92□□□□□ -2.1
ACTN1P12814 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
ACTN1P12814 AC006026.1-201ENST00000444025 1803 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ACTN1P12814 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
ACTN1P12814 Y_RNA.796-201ENST00000364268 102 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 Y_RNA.799-201ENST00000364992 102 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 Y_RNA.498-201ENST00000384460 102 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 ELOCP21-201ENST00000412558 336 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.91□□□□□ -2.1
ACTN1P12814 PCNPP5-201ENST00000452246 481 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 RNU6-1170P-201ENST00000515974 106 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 AC018448.1-201ENST00000552843 316 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 AL080274.1-201ENST00000605565 220 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 AC011476.5-201ENST00000615594 130 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 AC138305.3-201ENST00000624988 240 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
ACTN1P12814 Y_RNA.80-201ENST00000362996 102 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 Y_RNA.394-201ENST00000383942 103 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 Y_RNA.485-201ENST00000384395 102 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ACTN1P12814 RNU6-408P-201ENST00000515910 100 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 RNU6-976P-201ENST00000516086 111 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.9□□□□□ -2.11
ACTN1P12814 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.9□□□□□ -2.11
ACTN1P12814 BX248123.2-201ENST00000606318 124 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.9□□□□□ -2.11
ACTN1P12814 AC006157.1-201ENST00000611750 366 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 AC090574.1-201ENST00000623186 233 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 MIR338-201ENST00000636369 67 ntBASIC1.9□□□□□ -2.11
ACTN1P12814 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 RNU6-797P-201ENST00000363101 109 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 Y_RNA.116-201ENST00000363292 103 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 Y_RNA.122-201ENST00000363331 96 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 Y_RNA.197-201ENST00000364004 102 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 RNU6-1240P-201ENST00000365155 104 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 Y_RNA.431-201ENST00000384086 102 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 AL117342.1-201ENST00000404861 406 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 AC008134.1-201ENST00000420943 193 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 AC245517.4-201ENST00000448601 281 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 NDUFB4P10-201ENST00000452541 359 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 RNU7-95P-201ENST00000459222 64 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.89□□□□□ -2.11
ACTN1P12814 MIR2355-201ENST00000517199 87 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.89□□□□□ -2.11
ACTN1P12814 AL442163.3-201ENST00000554110 156 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.89□□□□□ -2.11
ACTN1P12814 AC090971.5-201ENST00000621102 293 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 MIR4272-201ENST00000635924 64 ntBASIC1.89□□□□□ -2.11
ACTN1P12814 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ACTN1P12814 RNU6-1266P-201ENST00000362794 105 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 Y_RNA.287-201ENST00000364853 94 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 Y_RNA.535-201ENST00000384612 99 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 RNA5SP467-201ENST00000391274 118 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 RAB28P5-201ENST00000427490 651 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 TOMM22P2-201ENST00000430735 237 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms