Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
CSB-PGBD3P0DP91 SNORD67-201ENST00000390833 111 ntBASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 RPL30P4-201ENST00000429309 333 ntBASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 TOMM22P2-201ENST00000430735 237 ntBASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 MICF-203ENST00000432679 129 ntBASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CSB-PGBD3P0DP91 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 MIR22-201ENST00000362190 85 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 RNU1-72P-201ENST00000362976 153 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 SNORD45.3-201ENST00000363836 72 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 RNU6-144P-201ENST00000383951 107 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 SNORA67.2-201ENST00000384300 149 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 MIR218-1-201ENST00000384999 110 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 Y_RNA.584-201ENST00000391090 114 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 RN7SKP284-201ENST00000411002 343 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 Y_RNA.622-201ENST00000411091 108 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 RHEBP3-201ENST00000411920 351 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 RPS12P18-201ENST00000442381 270 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 MIR4738-201ENST00000579134 87 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 MIR7157-201ENST00000635801 60 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 U6.95-201ENST00000636931 70 ntBASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CSB-PGBD3P0DP91 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 Y_RNA.280-201ENST00000364765 112 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 RNU6-1274P-201ENST00000384557 107 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 MIR1278-201ENST00000408753 81 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 AL139132.1-201ENST00000431587 344 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 AC117454.1-201ENST00000491120 168 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 RNU5F-4P-201ENST00000516581 114 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 AC090142.3-201ENST00000519012 385 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 MIR3121-201ENST00000579680 77 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 MIR5582-201ENST00000579697 68 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 MIR3199-1-201ENST00000582434 88 ntBASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CSB-PGBD3P0DP91 MAPK10-362ENST00000641864 4484 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 RNU6-1164P-201ENST00000364428 107 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 RNU6-597P-201ENST00000365620 102 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 HSPE1P21-201ENST00000438283 308 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 SNRPGP8-201ENST00000454064 226 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 RNA5SP367-201ENST00000516557 118 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 RNU6-1098P-201ENST00000516772 96 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 SCARNA3-201ENST00000517097 143 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 MIR3186-201ENST00000577404 85 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 Y_RNA.757-201ENST00000578934 114 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 MIR5047-201ENST00000579212 100 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 AC103988.1-201ENST00000566382 2177 ntBASIC4.12□□□□□ -1.75
CSB-PGBD3P0DP91 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 U8.1-201ENST00000362843 134 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 Y_RNA.124-201ENST00000363339 93 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 SNORA68.1-201ENST00000364537 132 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 MIR1294-201ENST00000408503 142 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 U6atac.2-201ENST00000408644 118 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 AL135938.1-201ENST00000443141 297 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 AL158147.1-201ENST00000443970 75 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 MIR449C-201ENST00000516047 92 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 RNU6-586P-201ENST00000517265 104 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 MIR3162-201ENST00000581818 82 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 ELOCP29-201ENST00000588193 334 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 MIR548AY-201ENST00000617669 107 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 AC093010.3-201ENST00000570269 15214 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 AL136360.1-201ENST00000503377 1900 ntBASIC4.11□□□□□ -1.75
CSB-PGBD3P0DP91 Z82209.1-201ENST00000422141 2135 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 AL035425.3-201ENST00000564206 4996 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 Y_RNA.35-201ENST00000362601 101 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 U3.8-201ENST00000363675 217 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 RNU6-944P-201ENST00000364023 107 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 MIR548B-201ENST00000385247 97 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 SNORA36B-201ENST00000410438 131 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 AC083906.5-201ENST00000503722 328 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 RNU7-115P-201ENST00000516433 55 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 MIR2276-201ENST00000516886 89 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 NDUFA5P6-201ENST00000542110 379 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 AC013412.1-201ENST00000610687 192 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 AC068647.2-201ENST00000637380 353 ntBASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSB-PGBD3P0DP91 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms