Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
RAB40ALP0C0E4 RNU6-661P-201ENST00000362409 107 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 AC022028.1-201ENST00000412054 408 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 HSPE1P9-201ENST00000440046 311 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 RPL36AP21-201ENST00000490372 323 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 HMGN1P13-201ENST00000505795 138 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 RNU1-142P-201ENST00000516682 145 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 SNORD116.3-201ENST00000517176 78 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 RNA5SP437-201ENST00000517249 129 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 AC027419.1-201ENST00000522976 328 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 AC024995.1-201ENST00000523014 93 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 RAB11AP2-201ENST00000545905 639 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 AL359075.3-201ENST00000613288 217 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 U2.1-201ENST00000618978 145 ntBASIC1.68□□□□□ -2.14
RAB40ALP0C0E4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 RNU4-79P-201ENST00000362764 141 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 SNORA63D-201ENST00000364359 132 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 RNU4-42P-201ENST00000364738 142 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 RNA5SP475-201ENST00000410568 110 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AF228730.4-201ENST00000421457 183 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 RAB28P5-201ENST00000427490 651 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AC096644.2-201ENST00000429278 159 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AC112492.4-201ENST00000456549 352 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 SNORD65B-201ENST00000459126 73 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 RNA5SP481-201ENST00000516814 122 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AL442163.3-201ENST00000554110 156 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 AC012493.3-201ENST00000604494 112 ntBASIC1.67□□□□□ -2.14
RAB40ALP0C0E4 RNU6-1115P-201ENST00000362490 106 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 RNU6-926P-201ENST00000384075 107 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 RNY3P4-201ENST00000384428 101 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 SNORA67.5-201ENST00000391036 107 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 AC073910.1-201ENST00000445047 438 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 FCF1P4-201ENST00000448326 183 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 Y_RNA.661-201ENST00000516003 99 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 SNORA44.1-201ENST00000517031 108 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 AL117336.2-201ENST00000602435 335 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 MIR502-201ENST00000606349 86 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 MIR3674-201ENST00000636576 68 ntBASIC1.66□□□□□ -2.14
RAB40ALP0C0E4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 RNU6-414P-201ENST00000363705 104 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 RNU5E-4P-201ENST00000364931 120 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AC108667.1-201ENST00000428618 249 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 RPS27P22-201ENST00000478056 241 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AL163195.1-201ENST00000496941 348 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AC010598.1-201ENST00000510378 103 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AC025465.3-201ENST00000510570 311 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 RNU6-408P-201ENST00000515910 100 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 RNU6-911P-201ENST00000516523 104 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AC006600.1-201ENST00000572529 153 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 MIR3684-201ENST00000579779 74 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 U6.73-201ENST00000619194 103 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 AC006435.5-201ENST00000624486 112 ntBASIC1.65□□□□□ -2.15
RAB40ALP0C0E4 MIR410-201ENST00000362222 80 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 RNU6-867P-201ENST00000364956 107 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 MIR30A-201ENST00000385092 71 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 Y_RNA.579-201ENST00000390939 94 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 SNORD78.2-201ENST00000391076 69 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 AC010469.2-201ENST00000496412 480 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 HMGB3P17-201ENST00000504195 649 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 RNU6-976P-201ENST00000516086 111 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 AC023157.2-201ENST00000540596 141 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 MIR4438-201ENST00000585271 93 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 VN1R91P-201ENST00000594377 169 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 AC138305.3-201ENST00000624988 240 ntBASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
RAB40ALP0C0E4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms