Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AK6P2-201ENST00000549020 471 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 AC233702.2-202ENST00000562547 291 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXC6P09630 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXC6P09630 AC090616.3-201ENST00000582184 217 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 MIR5006-201ENST00000583027 110 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 MIR5002-201ENST00000584713 97 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 SNORD113-5-201ENST00000607261 78 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 AL442067.1-201ENST00000613261 223 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 AC005562.2-201ENST00000618264 111 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 AC141273.2-201ENST00000618989 130 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 AC080100.1-201ENST00000624239 5356 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC6P09630 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HOXC6P09630 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXC6P09630 Y_RNA.4-201ENST00000362333 112 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 Y_RNA.20-201ENST00000362479 113 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 RNU6-245P-201ENST00000384020 107 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 Y_RNA.597-201ENST00000410463 100 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC6P09630 RAB28P5-201ENST00000427490 651 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 SERF1AP1-201ENST00000514575 187 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 RNU6-107P-201ENST00000516643 102 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC6P09630 MIR4498-201ENST00000577599 66 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 Y_RNA.783-201ENST00000613546 102 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 AC006001.4-201ENST00000622243 395 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 AC091932.3-201ENST00000624223 323 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.3□□□□□ -2.04
HOXC6P09630 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC6P09630 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC6P09630 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC6P09630 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HOXC6P09630 RNU1-62P-201ENST00000362599 164 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 RNU6-1266P-201ENST00000362794 105 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 RNU1-72P-201ENST00000362976 153 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 Y_RNA.269-201ENST00000364685 89 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 Y_RNA.331-201ENST00000365267 102 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 Y_RNA.569-201ENST00000384749 103 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 RNA5SP504-201ENST00000410676 117 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 RNU6-651P-201ENST00000411040 105 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 RNA5SP247-201ENST00000411181 105 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXC6P09630 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC6P09630 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC6P09630 CR769767.1-201ENST00000436337 346 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 MRPS10P1-201ENST00000448483 130 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXC6P09630 TCL6_2.1-201ENST00000615162 119 ntBASIC2.29□□□□□ -2.04
HOXC6P09630 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXC6P09630 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HOXC6P09630 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC6P09630 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC6P09630 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC6P09630 Y_RNA.140-201ENST00000363474 103 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 RNU6-944P-201ENST00000364023 107 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 SNORA72.2-201ENST00000365028 127 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 Y_RNA.352-201ENST00000365439 102 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 MIR320B2-201ENST00000408479 138 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 MIR548H3-201ENST00000408771 118 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 RPL30P4-201ENST00000429309 333 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 MICF-203ENST00000432679 129 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 Z98949.2-201ENST00000440996 144 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 AC009237.7-201ENST00000447357 229 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 AC074133.1-201ENST00000515696 183 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 RNA5SP112-201ENST00000515937 99 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXC6P09630 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.28□□□□□ -2.04
HOXC6P09630 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXC6P09630 RPL21P9-201ENST00000556149 474 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 MIR3145-201ENST00000580727 82 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 AL670379.2-201ENST00000604983 252 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC6P09630 ZNF271P-202ENST00000465539 1970 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 ZNF720P1-201ENST00000562403 1939 ntBASIC2.28□□□□□ -2.04
HOXC6P09630 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.28□□□□□ -2.05
HOXC6P09630 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
HOXC6P09630 RNU6-454P-201ENST00000364292 107 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 Y_RNA.230-201ENST00000364348 109 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 Y_RNA.383-201ENST00000383855 97 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 Y_RNA.418-201ENST00000384029 102 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 Y_RNA.478-201ENST00000384358 107 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC6P09630 RNU6-1199P-201ENST00000411249 104 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 MTND5P15-201ENST00000434246 349 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 AL445687.1-201ENST00000439946 251 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 RPS23P5-201ENST00000495419 428 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC6P09630 RNU2-31P-201ENST00000516954 155 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 MIR3199-1-201ENST00000582434 88 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 MIR3117-201ENST00000584034 78 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 AL356280.1-201ENST00000603614 379 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 AC022441.3-201ENST00000605737 136 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 AC127459.3-201ENST00000624328 466 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 AC080128.1-201ENST00000474389 1917 ntBASIC2.27□□□□□ -2.05
HOXC6P09630 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
HOXC6P09630 Z82209.1-201ENST00000422141 2135 ntBASIC2.26□□□□□ -2.05
HOXC6P09630 Y_RNA.76-201ENST00000362931 109 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms