Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
CD48P09326 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CD48P09326 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.93□□□□□ -2.1
CD48P09326 Y_RNA.26-201ENST00000362539 101 ntBASIC1.93□□□□□ -2.1
CD48P09326 Y_RNA.64-201ENST00000362845 102 ntBASIC1.93□□□□□ -2.1
CD48P09326 Y_RNA.105-201ENST00000363182 111 ntBASIC1.93□□□□□ -2.1
CD48P09326 RNU6-238P-201ENST00000363313 106 ntBASIC1.93□□□□□ -2.1
CD48P09326 RNU6-727P-201ENST00000363592 107 ntBASIC1.93□□□□□ -2.1
CD48P09326 U3.8-201ENST00000363675 217 ntBASIC1.93□□□□□ -2.1
CD48P09326 RNU6-806P-201ENST00000365147 105 ntBASIC1.93□□□□□ -2.1
CD48P09326 Y_RNA.415-201ENST00000384012 112 ntBASIC1.93□□□□□ -2.1
CD48P09326 RNU6-20P-201ENST00000384106 107 ntBASIC1.93□□□□□ -2.1
CD48P09326 RNU6-1310P-201ENST00000384153 107 ntBASIC1.93□□□□□ -2.1
CD48P09326 Y_RNA.498-201ENST00000384460 102 ntBASIC1.93□□□□□ -2.1
CD48P09326 Y_RNA.518-201ENST00000384552 113 ntBASIC1.93□□□□□ -2.1
CD48P09326 RNA5SP247-201ENST00000411181 105 ntBASIC1.93□□□□□ -2.1
CD48P09326 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.93□□□□□ -2.1
CD48P09326 AL390729.2-201ENST00000416137 156 ntBASIC1.93□□□□□ -2.1
CD48P09326 UQCRBP2-201ENST00000447827 297 ntBASIC1.93□□□□□ -2.1
CD48P09326 RNU7-14P-201ENST00000459331 62 ntBASIC1.93□□□□□ -2.1
CD48P09326 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
CD48P09326 AC018868.1-201ENST00000491307 315 ntBASIC1.93□□□□□ -2.1
CD48P09326 ATP5EP1-201ENST00000510257 156 ntBASIC1.93□□□□□ -2.1
CD48P09326 MIR449C-201ENST00000516047 92 ntBASIC1.93□□□□□ -2.1
CD48P09326 AP003733.2-201ENST00000529409 171 ntBASIC1.93□□□□□ -2.1
CD48P09326 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.93□□□□□ -2.1
CD48P09326 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.93□□□□□ -2.1
CD48P09326 MIR4300-201ENST00000581016 96 ntBASIC1.93□□□□□ -2.1
CD48P09326 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CD48P09326 RNU6-1264P-201ENST00000383891 107 ntBASIC1.92□□□□□ -2.1
CD48P09326 Y_RNA.570-201ENST00000384750 101 ntBASIC1.92□□□□□ -2.1
CD48P09326 MIR1283-1-201ENST00000408494 87 ntBASIC1.92□□□□□ -2.1
CD48P09326 AL603825.1-201ENST00000438481 80 ntBASIC1.92□□□□□ -2.1
CD48P09326 HMGN2P18-201ENST00000450680 270 ntBASIC1.92□□□□□ -2.1
CD48P09326 AC016925.1-201ENST00000458303 298 ntBASIC1.92□□□□□ -2.1
CD48P09326 RNU6-625P-201ENST00000459412 107 ntBASIC1.92□□□□□ -2.1
CD48P09326 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.92□□□□□ -2.1
CD48P09326 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.92□□□□□ -2.1
CD48P09326 AC004817.2-201ENST00000561794 651 ntBASIC1.92□□□□□ -2.1
CD48P09326 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
CD48P09326 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.92□□□□□ -2.1
CD48P09326 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.92□□□□□ -2.1
CD48P09326 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CD48P09326 SNORA25B-201ENST00000365507 128 ntBASIC1.91□□□□□ -2.1
CD48P09326 RNU6-472P-201ENST00000384299 107 ntBASIC1.91□□□□□ -2.1
CD48P09326 RNU6-937P-201ENST00000384325 106 ntBASIC1.91□□□□□ -2.1
CD48P09326 Y_RNA.512-201ENST00000384518 102 ntBASIC1.91□□□□□ -2.1
CD48P09326 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
CD48P09326 RAB28P5-201ENST00000427490 651 ntBASIC1.91□□□□□ -2.1
CD48P09326 HMGN2P9-201ENST00000476875 229 ntBASIC1.91□□□□□ -2.1
CD48P09326 AC098869.1-201ENST00000481627 292 ntBASIC1.91□□□□□ -2.1
CD48P09326 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.91□□□□□ -2.1
CD48P09326 AC093259.1-201ENST00000509755 300 ntBASIC1.91□□□□□ -2.1
CD48P09326 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
CD48P09326 RNU6-991P-201ENST00000516168 107 ntBASIC1.91□□□□□ -2.1
CD48P09326 Y_RNA.668-201ENST00000516233 93 ntBASIC1.91□□□□□ -2.1
CD48P09326 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.91□□□□□ -2.1
CD48P09326 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.91□□□□□ -2.1
CD48P09326 NDUFA5P6-201ENST00000542110 379 ntBASIC1.91□□□□□ -2.1
CD48P09326 AC110588.1-201ENST00000559699 137 ntBASIC1.91□□□□□ -2.1
CD48P09326 MIR3149-201ENST00000584629 83 ntBASIC1.91□□□□□ -2.1
CD48P09326 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.91□□□□□ -2.1
CD48P09326 AP000942.4-201ENST00000604811 241 ntBASIC1.91□□□□□ -2.1
CD48P09326 AC022441.3-201ENST00000605737 136 ntBASIC1.91□□□□□ -2.1
CD48P09326 MIR376A1-201ENST00000616574 68 ntBASIC1.91□□□□□ -2.1
CD48P09326 MIR3674-201ENST00000636576 68 ntBASIC1.91□□□□□ -2.1
CD48P09326 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
CD48P09326 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CD48P09326 RNU6-545P-201ENST00000362681 104 ntBASIC1.9□□□□□ -2.11
CD48P09326 snoU2_19.2-201ENST00000363024 80 ntBASIC1.9□□□□□ -2.11
CD48P09326 Y_RNA.193-201ENST00000363979 102 ntBASIC1.9□□□□□ -2.11
CD48P09326 RNU6-1305P-201ENST00000364353 104 ntBASIC1.9□□□□□ -2.11
CD48P09326 Y_RNA.238-201ENST00000364441 102 ntBASIC1.9□□□□□ -2.11
CD48P09326 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
CD48P09326 SNORD87-201ENST00000364849 89 ntBASIC1.9□□□□□ -2.11
CD48P09326 Y_RNA.332-201ENST00000365271 113 ntBASIC1.9□□□□□ -2.11
CD48P09326 Y_RNA.376-201ENST00000365638 108 ntBASIC1.9□□□□□ -2.11
CD48P09326 RNU6-1072P-201ENST00000384703 107 ntBASIC1.9□□□□□ -2.11
CD48P09326 RNU6-713P-201ENST00000384761 107 ntBASIC1.9□□□□□ -2.11
CD48P09326 RNU6-443P-201ENST00000384780 107 ntBASIC1.9□□□□□ -2.11
CD48P09326 MIR9-3-201ENST00000385084 90 ntBASIC1.9□□□□□ -2.11
CD48P09326 MIR548B-201ENST00000385247 97 ntBASIC1.9□□□□□ -2.11
CD48P09326 MIR764-201ENST00000390811 85 ntBASIC1.9□□□□□ -2.11
CD48P09326 Y_RNA.581-201ENST00000391017 97 ntBASIC1.9□□□□□ -2.11
CD48P09326 AL355497.1-201ENST00000406262 551 ntBASIC1.9□□□□□ -2.11
CD48P09326 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
CD48P09326 RNA5SP475-201ENST00000410568 110 ntBASIC1.9□□□□□ -2.11
CD48P09326 HMGN2P3-201ENST00000433603 273 ntBASIC1.9□□□□□ -2.11
CD48P09326 HMGN2P5-201ENST00000436882 273 ntBASIC1.9□□□□□ -2.11
CD48P09326 SEPT14P8-201ENST00000508026 178 ntBASIC1.9□□□□□ -2.11
CD48P09326 RNA5SP458-201ENST00000516188 119 ntBASIC1.9□□□□□ -2.11
CD48P09326 RNU6-965P-201ENST00000516721 96 ntBASIC1.9□□□□□ -2.11
CD48P09326 AC087441.2-201ENST00000529141 262 ntBASIC1.9□□□□□ -2.11
CD48P09326 AP002001.1-203ENST00000534002 267 ntBASIC1.9□□□□□ -2.11
CD48P09326 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.9□□□□□ -2.11
CD48P09326 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.9□□□□□ -2.11
CD48P09326 AC005176.2-201ENST00000596933 147 ntBASIC1.9□□□□□ -2.11
CD48P09326 SNORD113-5-201ENST00000607261 78 ntBASIC1.9□□□□□ -2.11
CD48P09326 AC004467.1-201ENST00000615678 330 ntBASIC1.9□□□□□ -2.11
CD48P09326 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms