Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AP005660.1-201ENST00000522972 293 ntBASIC2.05□□□□□ -2.08
MMP2P08253 AP002001.1-203ENST00000534002 267 ntBASIC2.05□□□□□ -2.08
MMP2P08253 MIR4287-201ENST00000579398 78 ntBASIC2.05□□□□□ -2.08
MMP2P08253 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
MMP2P08253 AC008737.2-201ENST00000599446 118 ntBASIC2.05□□□□□ -2.08
MMP2P08253 AC136443.5-201ENST00000603741 370 ntBASIC2.05□□□□□ -2.08
MMP2P08253 AC005034.5-201ENST00000604219 466 ntBASIC2.05□□□□□ -2.08
MMP2P08253 AL021879.1-201ENST00000611756 288 ntBASIC2.05□□□□□ -2.08
MMP2P08253 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.05□□□□□ -2.08
MMP2P08253 SNORA72.2-201ENST00000365028 127 ntBASIC2.04□□□□□ -2.08
MMP2P08253 Y_RNA.380-201ENST00000365663 111 ntBASIC2.04□□□□□ -2.08
MMP2P08253 RNU6-1310P-201ENST00000384153 107 ntBASIC2.04□□□□□ -2.08
MMP2P08253 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
MMP2P08253 AL121890.1-201ENST00000435457 205 ntBASIC2.04□□□□□ -2.08
MMP2P08253 MTND2P29-201ENST00000438595 412 ntBASIC2.04□□□□□ -2.08
MMP2P08253 AL353689.1-201ENST00000438895 199 ntBASIC2.04□□□□□ -2.08
MMP2P08253 MTND5P22-201ENST00000458380 195 ntBASIC2.04□□□□□ -2.08
MMP2P08253 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
MMP2P08253 MTATP8P1-201ENST00000467115 207 ntBASIC2.04□□□□□ -2.08
MMP2P08253 RPS29P21-201ENST00000496272 170 ntBASIC2.04□□□□□ -2.08
MMP2P08253 MIR3169-201ENST00000578032 83 ntBASIC2.04□□□□□ -2.08
MMP2P08253 MIR4648-201ENST00000580107 72 ntBASIC2.04□□□□□ -2.08
MMP2P08253 AC005176.2-201ENST00000596933 147 ntBASIC2.04□□□□□ -2.08
MMP2P08253 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
MMP2P08253 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
MMP2P08253 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.04□□□□□ -2.08
MMP2P08253 AP000553.5-201ENST00000641933 54 ntBASIC2.04□□□□□ -2.08
MMP2P08253 ZNF702P-202ENST00000434269 1966 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AC131280.1-202ENST00000624067 4211 ntBASIC2.03□□□□□ -2.08
MMP2P08253 MIR410-201ENST00000362222 80 ntBASIC2.03□□□□□ -2.08
MMP2P08253 RNA5SP465-201ENST00000391195 109 ntBASIC2.03□□□□□ -2.08
MMP2P08253 MIR548F4-201ENST00000408515 105 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AC060773.1-201ENST00000421698 310 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AC096920.1-201ENST00000423991 241 ntBASIC2.03□□□□□ -2.08
MMP2P08253 YWHAEP4-201ENST00000505390 198 ntBASIC2.03□□□□□ -2.08
MMP2P08253 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
MMP2P08253 Y_RNA.713-201ENST00000517013 96 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AC025647.1-201ENST00000517879 253 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AC131281.1-201ENST00000522984 164 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AC055872.1-201ENST00000570978 278 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AL355297.3-201ENST00000604082 446 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AC004467.1-201ENST00000615678 330 ntBASIC2.03□□□□□ -2.08
MMP2P08253 AC091932.3-201ENST00000624223 323 ntBASIC2.03□□□□□ -2.08
MMP2P08253 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
MMP2P08253 AC092881.1-201ENST00000638218 2733 ntBASIC2.03□□□□□ -2.09
MMP2P08253 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
MMP2P08253 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MMP2P08253 Y_RNA.143-201ENST00000363520 106 ntBASIC2.02□□□□□ -2.09
MMP2P08253 RNU6-454P-201ENST00000364292 107 ntBASIC2.02□□□□□ -2.09
MMP2P08253 Y_RNA.459-201ENST00000384251 102 ntBASIC2.02□□□□□ -2.09
MMP2P08253 MIR597-201ENST00000384968 97 ntBASIC2.02□□□□□ -2.09
MMP2P08253 MIR1283-2-201ENST00000408621 87 ntBASIC2.02□□□□□ -2.09
MMP2P08253 RNU2-20P-201ENST00000410425 191 ntBASIC2.02□□□□□ -2.09
MMP2P08253 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.02□□□□□ -2.09
MMP2P08253 AC008134.1-201ENST00000420943 193 ntBASIC2.02□□□□□ -2.09
MMP2P08253 HMGN2P3-201ENST00000433603 273 ntBASIC2.02□□□□□ -2.09
MMP2P08253 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.02□□□□□ -2.09
MMP2P08253 HMGN2P5-201ENST00000436882 273 ntBASIC2.02□□□□□ -2.09
MMP2P08253 AC005002.2-201ENST00000438228 269 ntBASIC2.02□□□□□ -2.09
MMP2P08253 HMGN1P10-201ENST00000474557 553 ntBASIC2.02□□□□□ -2.09
MMP2P08253 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
MMP2P08253 MRPS35P2-201ENST00000508242 191 ntBASIC2.02□□□□□ -2.09
MMP2P08253 RNU6-1041P-201ENST00000516254 102 ntBASIC2.02□□□□□ -2.09
MMP2P08253 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
MMP2P08253 RNU6-1266P-201ENST00000362794 105 ntBASIC2.01□□□□□ -2.09
MMP2P08253 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.01□□□□□ -2.09
MMP2P08253 AC016909.1-201ENST00000415916 166 ntBASIC2.01□□□□□ -2.09
MMP2P08253 AL358176.2-201ENST00000425769 204 ntBASIC2.01□□□□□ -2.09
MMP2P08253 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MMP2P08253 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
MMP2P08253 MRPS17P9-201ENST00000511924 393 ntBASIC2.01□□□□□ -2.09
MMP2P08253 RNU6-897P-201ENST00000517135 105 ntBASIC2.01□□□□□ -2.09
MMP2P08253 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.01□□□□□ -2.09
MMP2P08253 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MMP2P08253 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
MMP2P08253 Y_RNA.101-201ENST00000363154 102 ntBASIC2□□□□□ -2.09
MMP2P08253 Y_RNA.152-201ENST00000363578 100 ntBASIC2□□□□□ -2.09
MMP2P08253 Y_RNA.210-201ENST00000364161 110 ntBASIC2□□□□□ -2.09
MMP2P08253 Y_RNA.230-201ENST00000364348 109 ntBASIC2□□□□□ -2.09
MMP2P08253 RNU6-1240P-201ENST00000365155 104 ntBASIC2□□□□□ -2.09
MMP2P08253 RNA5SP37-201ENST00000365420 130 ntBASIC2□□□□□ -2.09
MMP2P08253 RNU6-937P-201ENST00000384325 106 ntBASIC2□□□□□ -2.09
MMP2P08253 MIR1253-201ENST00000408273 105 ntBASIC2□□□□□ -2.09
MMP2P08253 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2□□□□□ -2.09
MMP2P08253 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2□□□□□ -2.09
MMP2P08253 ATP5J2P3-201ENST00000451550 258 ntBASIC2□□□□□ -2.09
MMP2P08253 AC011406.1-201ENST00000512440 370 ntBASIC2□□□□□ -2.09
MMP2P08253 SNORA40.15-201ENST00000516884 107 ntBASIC2□□□□□ -2.09
MMP2P08253 SUMO2P18-201ENST00000518873 252 ntBASIC2□□□□□ -2.09
MMP2P08253 AL117187.1-201ENST00000555482 181 ntBASIC2□□□□□ -2.09
MMP2P08253 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
MMP2P08253 AC008749.1-201ENST00000597650 306 ntBASIC2□□□□□ -2.09
MMP2P08253 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
MMP2P08253 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
MMP2P08253 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MMP2P08253 RNU6-1309P-201ENST00000363305 108 ntBASIC1.99□□□□□ -2.09
MMP2P08253 Y_RNA.183-201ENST00000363882 113 ntBASIC1.99□□□□□ -2.09
MMP2P08253 RNU6-1175P-201ENST00000365200 107 ntBASIC1.99□□□□□ -2.09
MMP2P08253 RNU6-1105P-201ENST00000384774 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms