Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.94□□□□□ -2.26
CD74P04233 AC099654.5-201ENST00000636479 350 ntBASIC0.94□□□□□ -2.26
CD74P04233 MTND5P16-201ENST00000460269 1703 ntBASIC0.93□□□□□ -2.26
CD74P04233 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CD74P04233 RNA5SP327-201ENST00000362494 101 ntBASIC0.93□□□□□ -2.26
CD74P04233 Y_RNA.106-201ENST00000363189 100 ntBASIC0.93□□□□□ -2.26
CD74P04233 RNU6-137P-201ENST00000363680 108 ntBASIC0.93□□□□□ -2.26
CD74P04233 RNU5F-3P-201ENST00000363767 117 ntBASIC0.93□□□□□ -2.26
CD74P04233 Y_RNA.184-201ENST00000363884 108 ntBASIC0.93□□□□□ -2.26
CD74P04233 RNU6-596P-201ENST00000365395 98 ntBASIC0.93□□□□□ -2.26
CD74P04233 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CD74P04233 MIR1276-201ENST00000408707 83 ntBASIC0.93□□□□□ -2.26
CD74P04233 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.93□□□□□ -2.26
CD74P04233 USP9YP16-201ENST00000430287 407 ntBASIC0.93□□□□□ -2.26
CD74P04233 MTND4P18-201ENST00000447010 465 ntBASIC0.93□□□□□ -2.26
CD74P04233 RPS27P1-201ENST00000450552 247 ntBASIC0.93□□□□□ -2.26
CD74P04233 USP9YP23-201ENST00000455085 407 ntBASIC0.93□□□□□ -2.26
CD74P04233 MTND5P5-201ENST00000503764 376 ntBASIC0.93□□□□□ -2.26
CD74P04233 AC093303.1-201ENST00000514549 295 ntBASIC0.93□□□□□ -2.26
CD74P04233 SNORA31.10-201ENST00000516482 106 ntBASIC0.93□□□□□ -2.26
CD74P04233 AC023157.2-201ENST00000540596 141 ntBASIC0.93□□□□□ -2.26
CD74P04233 AC093023.1-201ENST00000547375 507 ntBASIC0.93□□□□□ -2.26
CD74P04233 AL137100.2-201ENST00000555786 315 ntBASIC0.93□□□□□ -2.26
CD74P04233 AC018638.8-201ENST00000588755 281 ntBASIC0.93□□□□□ -2.26
CD74P04233 AC022217.4-201ENST00000604389 163 ntBASIC0.93□□□□□ -2.26
CD74P04233 AC100812.1-201ENST00000607622 580 ntBASIC0.93□□□□□ -2.26
CD74P04233 MIR6078-201ENST00000611069 100 ntBASIC0.93□□□□□ -2.26
CD74P04233 AC040896.1-201ENST00000613819 479 ntBASIC0.93□□□□□ -2.26
CD74P04233 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CD74P04233 MIR548F5-201ENST00000408421 86 ntBASIC0.92□□□□□ -2.26
CD74P04233 MIR1277-201ENST00000408536 78 ntBASIC0.92□□□□□ -2.26
CD74P04233 RNU6-1001P-201ENST00000411265 100 ntBASIC0.92□□□□□ -2.26
CD74P04233 AC245047.3-201ENST00000429428 127 ntBASIC0.92□□□□□ -2.26
CD74P04233 AL353997.1-201ENST00000432936 108 ntBASIC0.92□□□□□ -2.26
CD74P04233 RPS3AP52-201ENST00000435639 297 ntBASIC0.92□□□□□ -2.26
CD74P04233 DYNLT3P2-201ENST00000442517 295 ntBASIC0.92□□□□□ -2.26
CD74P04233 NDUFB4P10-201ENST00000452541 359 ntBASIC0.92□□□□□ -2.26
CD74P04233 SNORD5.1-201ENST00000458800 75 ntBASIC0.92□□□□□ -2.26
CD74P04233 RNU6-329P-201ENST00000459618 107 ntBASIC0.92□□□□□ -2.26
CD74P04233 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.92□□□□□ -2.26
CD74P04233 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.92□□□□□ -2.26
CD74P04233 AC011352.1-201ENST00000512300 793 ntBASIC0.92□□□□□ -2.26
CD74P04233 Y_RNA.683-201ENST00000516508 93 ntBASIC0.92□□□□□ -2.26
CD74P04233 APOOP3-201ENST00000536787 586 ntBASIC0.92□□□□□ -2.26
CD74P04233 CYP3A52P-201ENST00000563326 91 ntBASIC0.92□□□□□ -2.26
CD74P04233 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.92□□□□□ -2.26
CD74P04233 AC021506.2-201ENST00000612354 169 ntBASIC0.92□□□□□ -2.26
CD74P04233 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
CD74P04233 AC007014.2-201ENST00000615581 479 ntBASIC0.92□□□□□ -2.26
CD74P04233 AC027514.1-201ENST00000588561 1603 ntBASIC0.92□□□□□ -2.26
CD74P04233 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CD74P04233 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
CD74P04233 Y_RNA.6-201ENST00000362350 114 ntBASIC0.91□□□□□ -2.26
CD74P04233 RNU1-22P-201ENST00000363334 158 ntBASIC0.91□□□□□ -2.26
CD74P04233 RNU6-281P-201ENST00000384212 103 ntBASIC0.91□□□□□ -2.26
CD74P04233 RNU6-510P-201ENST00000391239 108 ntBASIC0.91□□□□□ -2.26
CD74P04233 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.91□□□□□ -2.26
CD74P04233 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.91□□□□□ -2.26
CD74P04233 SNX2P2-201ENST00000424553 323 ntBASIC0.91□□□□□ -2.26
CD74P04233 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
CD74P04233 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.91□□□□□ -2.26
CD74P04233 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.91□□□□□ -2.26
CD74P04233 SNORD65B-201ENST00000459126 73 ntBASIC0.91□□□□□ -2.26
CD74P04233 RPS27P22-201ENST00000478056 241 ntBASIC0.91□□□□□ -2.26
CD74P04233 AC069439.1-201ENST00000494739 167 ntBASIC0.91□□□□□ -2.26
CD74P04233 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
CD74P04233 AC026782.1-201ENST00000512952 449 ntBASIC0.91□□□□□ -2.26
CD74P04233 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.91□□□□□ -2.26
CD74P04233 RNU6-1114P-201ENST00000516022 107 ntBASIC0.91□□□□□ -2.26
CD74P04233 RNU7-128P-201ENST00000517247 62 ntBASIC0.91□□□□□ -2.26
CD74P04233 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.91□□□□□ -2.26
CD74P04233 MIR4438-201ENST00000585271 93 ntBASIC0.91□□□□□ -2.26
CD74P04233 AC022432.1-201ENST00000595739 310 ntBASIC0.91□□□□□ -2.26
CD74P04233 AC018462.2-201ENST00000605375 395 ntBASIC0.91□□□□□ -2.26
CD74P04233 AL021879.1-201ENST00000611756 288 ntBASIC0.91□□□□□ -2.26
CD74P04233 AC084782.3-201ENST00000612282 578 ntBASIC0.91□□□□□ -2.26
CD74P04233 MIR6504-201ENST00000613520 61 ntBASIC0.91□□□□□ -2.26
CD74P04233 AC002553.4-201ENST00000616896 331 ntBASIC0.91□□□□□ -2.26
CD74P04233 U6.73-201ENST00000619194 103 ntBASIC0.91□□□□□ -2.26
CD74P04233 MIR8054-201ENST00000620877 86 ntBASIC0.91□□□□□ -2.26
CD74P04233 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.91□□□□□ -2.26
CD74P04233 RNU6-53P-201ENST00000365367 106 ntBASIC0.9□□□□□ -2.27
CD74P04233 RNU6-950P-201ENST00000384651 107 ntBASIC0.9□□□□□ -2.27
CD74P04233 RNU6-1031P-201ENST00000384773 107 ntBASIC0.9□□□□□ -2.27
CD74P04233 RNU6-440P-201ENST00000390882 105 ntBASIC0.9□□□□□ -2.27
CD74P04233 MIR190B-201ENST00000401119 79 ntBASIC0.9□□□□□ -2.27
CD74P04233 Y_RNA.594-201ENST00000410373 140 ntBASIC0.9□□□□□ -2.27
CD74P04233 RNU6-1050P-201ENST00000410388 107 ntBASIC0.9□□□□□ -2.27
CD74P04233 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.9□□□□□ -2.27
CD74P04233 MTND1P34-201ENST00000438556 671 ntBASIC0.9□□□□□ -2.27
CD74P04233 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.9□□□□□ -2.27
CD74P04233 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
CD74P04233 HMGN1P7-201ENST00000491722 313 ntBASIC0.9□□□□□ -2.27
CD74P04233 AC010469.2-201ENST00000496412 480 ntBASIC0.9□□□□□ -2.27
CD74P04233 Y_RNA.670-201ENST00000516255 105 ntBASIC0.9□□□□□ -2.27
CD74P04233 RNU7-99P-201ENST00000516271 62 ntBASIC0.9□□□□□ -2.27
CD74P04233 RNU6-1016P-201ENST00000516689 94 ntBASIC0.9□□□□□ -2.27
CD74P04233 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.9□□□□□ -2.27
CD74P04233 AF235103.2-201ENST00000525753 346 ntBASIC0.9□□□□□ -2.27
CD74P04233 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms