Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNU7-175P-201ENST00000515915 61 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-120P-201ENST00000516077 103 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-344P-201ENST00000516635 111 ntBASIC1.32□□□□□ -2.2
MMP1P03956 RNU6-1223P-201ENST00000517124 104 ntBASIC1.32□□□□□ -2.2
MMP1P03956 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.32□□□□□ -2.2
MMP1P03956 AC134698.4-201ENST00000523451 826 ntBASIC1.32□□□□□ -2.2
MMP1P03956 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.32□□□□□ -2.2
MMP1P03956 APOOP3-201ENST00000536787 586 ntBASIC1.32□□□□□ -2.2
MMP1P03956 MIR151B-201ENST00000584249 96 ntBASIC1.32□□□□□ -2.2
MMP1P03956 UBE2V2P2-201ENST00000587677 504 ntBASIC1.32□□□□□ -2.2
MMP1P03956 MIR6788-201ENST00000618842 66 ntBASIC1.32□□□□□ -2.2
MMP1P03956 PVT1_3.1-201ENST00000620853 95 ntBASIC1.32□□□□□ -2.2
MMP1P03956 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
MMP1P03956 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.32□□□□□ -2.2
MMP1P03956 AL161722.3-201ENST00000605789 2983 ntBASIC1.31□□□□□ -2.2
MMP1P03956 RNY1P16-201ENST00000363063 111 ntBASIC1.31□□□□□ -2.2
MMP1P03956 Y_RNA.106-201ENST00000363189 100 ntBASIC1.31□□□□□ -2.2
MMP1P03956 Y_RNA.142-201ENST00000363491 102 ntBASIC1.31□□□□□ -2.2
MMP1P03956 SNORD114-26-201ENST00000363543 72 ntBASIC1.31□□□□□ -2.2
MMP1P03956 RNU6-1019P-201ENST00000364424 107 ntBASIC1.31□□□□□ -2.2
MMP1P03956 RNU6-975P-201ENST00000384296 105 ntBASIC1.31□□□□□ -2.2
MMP1P03956 MIR586-201ENST00000385035 97 ntBASIC1.31□□□□□ -2.2
MMP1P03956 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
MMP1P03956 AL117342.1-201ENST00000404861 406 ntBASIC1.31□□□□□ -2.2
MMP1P03956 Y_RNA.646-201ENST00000410980 101 ntBASIC1.31□□□□□ -2.2
MMP1P03956 RNU6-370P-201ENST00000411008 104 ntBASIC1.31□□□□□ -2.2
MMP1P03956 AC060773.1-201ENST00000421698 310 ntBASIC1.31□□□□□ -2.2
MMP1P03956 USMG5P1-201ENST00000425964 177 ntBASIC1.31□□□□□ -2.2
MMP1P03956 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
MMP1P03956 JTBP1-201ENST00000441314 247 ntBASIC1.31□□□□□ -2.2
MMP1P03956 Y_RNA.635-201ENST00000459041 101 ntBASIC1.31□□□□□ -2.2
MMP1P03956 U8.22-201ENST00000459141 133 ntBASIC1.31□□□□□ -2.2
MMP1P03956 AC091179.3-201ENST00000474761 144 ntBASIC1.31□□□□□ -2.2
MMP1P03956 AC093852.1-201ENST00000503587 266 ntBASIC1.31□□□□□ -2.2
MMP1P03956 AL117351.2-201ENST00000513571 157 ntBASIC1.31□□□□□ -2.2
MMP1P03956 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
MMP1P03956 AL050343.2-201ENST00000607338 280 ntBASIC1.31□□□□□ -2.2
MMP1P03956 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.31□□□□□ -2.2
MMP1P03956 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
MMP1P03956 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
MMP1P03956 RNU6-1305P-201ENST00000364353 104 ntBASIC1.3□□□□□ -2.2
MMP1P03956 SNORD87-201ENST00000364849 89 ntBASIC1.3□□□□□ -2.2
MMP1P03956 Y_RNA.415-201ENST00000384012 112 ntBASIC1.3□□□□□ -2.2
MMP1P03956 RNU6-281P-201ENST00000384212 103 ntBASIC1.3□□□□□ -2.2
MMP1P03956 RNU6-310P-201ENST00000384655 107 ntBASIC1.3□□□□□ -2.2
MMP1P03956 MIR222-201ENST00000384992 110 ntBASIC1.3□□□□□ -2.2
MMP1P03956 RNU1-139P-201ENST00000391307 165 ntBASIC1.3□□□□□ -2.2
MMP1P03956 MIR190B-201ENST00000401119 79 ntBASIC1.3□□□□□ -2.2
MMP1P03956 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.3□□□□□ -2.2
MMP1P03956 FTH1P12-201ENST00000432137 551 ntBASIC1.3□□□□□ -2.2
MMP1P03956 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.3□□□□□ -2.2
MMP1P03956 MTND4P18-201ENST00000447010 465 ntBASIC1.3□□□□□ -2.2
MMP1P03956 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.3□□□□□ -2.2
MMP1P03956 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.3□□□□□ -2.2
MMP1P03956 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.3□□□□□ -2.2
MMP1P03956 RNU6-507P-201ENST00000516045 100 ntBASIC1.3□□□□□ -2.2
MMP1P03956 SNORA25.14-201ENST00000516481 132 ntBASIC1.3□□□□□ -2.2
MMP1P03956 RNU2-34P-201ENST00000516534 121 ntBASIC1.3□□□□□ -2.2
MMP1P03956 RNU6-1198P-201ENST00000516904 67 ntBASIC1.3□□□□□ -2.2
MMP1P03956 RNA5SP437-201ENST00000517249 129 ntBASIC1.3□□□□□ -2.2
MMP1P03956 AL121579.1-201ENST00000555129 305 ntBASIC1.3□□□□□ -2.2
MMP1P03956 AL160236.1-201ENST00000556317 195 ntBASIC1.3□□□□□ -2.2
MMP1P03956 MIR4753-201ENST00000585119 83 ntBASIC1.3□□□□□ -2.2
MMP1P03956 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.3□□□□□ -2.2
MMP1P03956 AC100812.1-201ENST00000607622 580 ntBASIC1.3□□□□□ -2.2
MMP1P03956 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.3□□□□□ -2.2
MMP1P03956 AL132765.2-201ENST00000610812 351 ntBASIC1.3□□□□□ -2.2
MMP1P03956 AC092794.2-201ENST00000620933 563 ntBASIC1.3□□□□□ -2.2
MMP1P03956 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.29□□□□□ -2.2
MMP1P03956 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
MMP1P03956 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU6-727P-201ENST00000363592 107 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU6-271P-201ENST00000363858 105 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU1-96P-201ENST00000364163 162 ntBASIC1.29□□□□□ -2.2
MMP1P03956 SNORA63D-201ENST00000364359 132 ntBASIC1.29□□□□□ -2.2
MMP1P03956 SNORD116-29-201ENST00000384516 83 ntBASIC1.29□□□□□ -2.2
MMP1P03956 MIR548B-201ENST00000385247 97 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.29□□□□□ -2.2
MMP1P03956 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.29□□□□□ -2.2
MMP1P03956 AC016909.1-201ENST00000415916 166 ntBASIC1.29□□□□□ -2.2
MMP1P03956 EIF1P2-201ENST00000428233 350 ntBASIC1.29□□□□□ -2.2
MMP1P03956 MTCO3P10-201ENST00000455912 772 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU6-1114P-201ENST00000516022 107 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU6-1041P-201ENST00000516254 102 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU6-875P-201ENST00000516488 106 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNA5SP481-201ENST00000516814 122 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU1-117P-201ENST00000517041 158 ntBASIC1.29□□□□□ -2.2
MMP1P03956 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.29□□□□□ -2.2
MMP1P03956 MIR548S-201ENST00000581352 82 ntBASIC1.29□□□□□ -2.2
MMP1P03956 AC125232.2-201ENST00000592457 143 ntBASIC1.29□□□□□ -2.2
MMP1P03956 MZT1P2-201ENST00000604387 248 ntBASIC1.29□□□□□ -2.2
MMP1P03956 AC113139.1-201ENST00000605049 239 ntBASIC1.29□□□□□ -2.2
MMP1P03956 AL353149.1-201ENST00000610667 244 ntBASIC1.29□□□□□ -2.2
MMP1P03956 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
MMP1P03956 AL359697.1-201ENST00000624879 587 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.29□□□□□ -2.2
MMP1P03956 MTND5P16-201ENST00000460269 1703 ntBASIC1.29□□□□□ -2.2
MMP1P03956 RNU6-1235P-201ENST00000384559 107 ntBASIC1.28□□□□□ -2.2
MMP1P03956 RNU6-541P-201ENST00000384709 110 ntBASIC1.28□□□□□ -2.2
MMP1P03956 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms