Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SCARNA1-201ENST00000517138 166 ntBASIC0.17□□□□□ -2.38
APOA1P02647 AC091144.1-201ENST00000519573 138 ntBASIC0.17□□□□□ -2.38
APOA1P02647 AC023442.1-201ENST00000531247 422 ntBASIC0.17□□□□□ -2.38
APOA1P02647 AC120024.3-201ENST00000603167 156 ntBASIC0.17□□□□□ -2.38
APOA1P02647 AC243829.6-201ENST00000612652 106 ntBASIC0.17□□□□□ -2.38
APOA1P02647 AL158209.2-201ENST00000619266 216 ntBASIC0.17□□□□□ -2.38
APOA1P02647 RNU6-280P-201ENST00000364145 104 ntBASIC0.16□□□□□ -2.38
APOA1P02647 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.16□□□□□ -2.38
APOA1P02647 AC079354.2-201ENST00000453523 154 ntBASIC0.16□□□□□ -2.38
APOA1P02647 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
APOA1P02647 AC091885.1-201ENST00000506658 268 ntBASIC0.16□□□□□ -2.38
APOA1P02647 MTND1P22-201ENST00000510572 951 ntBASIC0.16□□□□□ -2.38
APOA1P02647 RNU6-107P-201ENST00000516643 102 ntBASIC0.16□□□□□ -2.38
APOA1P02647 AC060788.1-201ENST00000521318 469 ntBASIC0.16□□□□□ -2.38
APOA1P02647 AC104984.5-201ENST00000586878 94 ntBASIC0.16□□□□□ -2.38
APOA1P02647 AC007684.1-201ENST00000609671 477 ntBASIC0.16□□□□□ -2.38
APOA1P02647 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.16□□□□□ -2.38
APOA1P02647 AC007494.3-201ENST00000624660 743 ntBASIC0.16□□□□□ -2.38
APOA1P02647 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.15□□□□□ -2.39
APOA1P02647 AL442644.1-201ENST00000454390 3105 ntBASIC0.15□□□□□ -2.39
APOA1P02647 Y_RNA.179-201ENST00000363844 90 ntBASIC0.15□□□□□ -2.39
APOA1P02647 RNU6-407P-201ENST00000365280 104 ntBASIC0.15□□□□□ -2.39
APOA1P02647 SNORA20B-201ENST00000384220 132 ntBASIC0.15□□□□□ -2.39
APOA1P02647 SNORD37.1-201ENST00000390968 65 ntBASIC0.15□□□□□ -2.39
APOA1P02647 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.15□□□□□ -2.39
APOA1P02647 MTND2P18-201ENST00000419962 1030 ntBASIC0.15□□□□□ -2.39
APOA1P02647 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.15□□□□□ -2.39
APOA1P02647 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.15□□□□□ -2.39
APOA1P02647 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.15□□□□□ -2.39
APOA1P02647 UBL5P4-201ENST00000562584 236 ntBASIC0.15□□□□□ -2.39
APOA1P02647 AC009094.1-201ENST00000564443 426 ntBASIC0.15□□□□□ -2.39
APOA1P02647 AL133215.3-201ENST00000609801 448 ntBASIC0.15□□□□□ -2.39
APOA1P02647 AC243829.3-201ENST00000622177 108 ntBASIC0.15□□□□□ -2.39
APOA1P02647 AC008133.2-201ENST00000624540 351 ntBASIC0.15□□□□□ -2.39
APOA1P02647 AC027279.3-201ENST00000625055 122 ntBASIC0.15□□□□□ -2.39
APOA1P02647 RNU5F-3P-201ENST00000363767 117 ntBASIC0.14□□□□□ -2.39
APOA1P02647 SNORD113.3-201ENST00000364630 78 ntBASIC0.14□□□□□ -2.39
APOA1P02647 MT-TH-201ENST00000387441 69 ntBASIC0.14□□□□□ -2.39
APOA1P02647 RPL30P16-201ENST00000419341 429 ntBASIC0.14□□□□□ -2.39
APOA1P02647 AC018865.2-201ENST00000423631 129 ntBASIC0.14□□□□□ -2.39
APOA1P02647 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.14□□□□□ -2.39
APOA1P02647 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.14□□□□□ -2.39
APOA1P02647 AL353572.1-201ENST00000442490 417 ntBASIC0.14□□□□□ -2.39
APOA1P02647 HSFY5P-201ENST00000453726 309 ntBASIC0.14□□□□□ -2.39
APOA1P02647 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.14□□□□□ -2.39
APOA1P02647 AC018710.1-201ENST00000506509 158 ntBASIC0.14□□□□□ -2.39
APOA1P02647 RNA5SP20-201ENST00000515976 84 ntBASIC0.14□□□□□ -2.39
APOA1P02647 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.14□□□□□ -2.39
APOA1P02647 AL118558.2-201ENST00000556294 238 ntBASIC0.14□□□□□ -2.39
APOA1P02647 MIR3915-201ENST00000578518 97 ntBASIC0.14□□□□□ -2.39
APOA1P02647 MIR6715A-201ENST00000615929 79 ntBASIC0.14□□□□□ -2.39
APOA1P02647 AC073544.1-201ENST00000600110 1595 ntBASIC0.14□□□□□ -2.39
APOA1P02647 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
APOA1P02647 MIR1-1-201ENST00000362147 71 ntBASIC0.13□□□□□ -2.39
APOA1P02647 RNA5SP48-201ENST00000363969 126 ntBASIC0.13□□□□□ -2.39
APOA1P02647 Y_RNA.338-201ENST00000365320 114 ntBASIC0.13□□□□□ -2.39
APOA1P02647 Y_RNA.378-201ENST00000365652 113 ntBASIC0.13□□□□□ -2.39
APOA1P02647 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.13□□□□□ -2.39
APOA1P02647 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.13□□□□□ -2.39
APOA1P02647 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.13□□□□□ -2.39
APOA1P02647 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.13□□□□□ -2.39
APOA1P02647 RNU6-1053P-201ENST00000515930 101 ntBASIC0.13□□□□□ -2.39
APOA1P02647 RNU6-1332P-201ENST00000516666 104 ntBASIC0.13□□□□□ -2.39
APOA1P02647 SNORA74.3-201ENST00000517108 154 ntBASIC0.13□□□□□ -2.39
APOA1P02647 MIR4498-201ENST00000577599 66 ntBASIC0.13□□□□□ -2.39
APOA1P02647 AC009248.2-201ENST00000619826 254 ntBASIC0.13□□□□□ -2.39
APOA1P02647 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
APOA1P02647 SNORD14.1-201ENST00000365609 90 ntBASIC0.12□□□□□ -2.39
APOA1P02647 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
APOA1P02647 RNU6-159P-201ENST00000391080 106 ntBASIC0.12□□□□□ -2.39
APOA1P02647 RNU6-1158P-201ENST00000391167 107 ntBASIC0.12□□□□□ -2.39
APOA1P02647 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
APOA1P02647 MTND1P27-201ENST00000451117 902 ntBASIC0.12□□□□□ -2.39
APOA1P02647 AC114811.1-201ENST00000507207 168 ntBASIC0.12□□□□□ -2.39
APOA1P02647 AC093303.1-201ENST00000514549 295 ntBASIC0.12□□□□□ -2.39
APOA1P02647 RNU6-1278P-201ENST00000516130 107 ntBASIC0.12□□□□□ -2.39
APOA1P02647 AC093027.1-201ENST00000546698 429 ntBASIC0.12□□□□□ -2.39
APOA1P02647 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.12□□□□□ -2.39
APOA1P02647 AC100830.2-201ENST00000581636 240 ntBASIC0.12□□□□□ -2.39
APOA1P02647 AC136443.5-201ENST00000603741 370 ntBASIC0.12□□□□□ -2.39
APOA1P02647 AC005014.3-201ENST00000605985 190 ntBASIC0.12□□□□□ -2.39
APOA1P02647 AL136370.1-201ENST00000608166 691 ntBASIC0.12□□□□□ -2.39
APOA1P02647 AC010999.1-201ENST00000611856 324 ntBASIC0.12□□□□□ -2.39
APOA1P02647 VTRNA1-3-201ENST00000365645 89 ntBASIC0.11□□□□□ -2.39
APOA1P02647 MIR516B2-201ENST00000385190 85 ntBASIC0.11□□□□□ -2.39
APOA1P02647 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.11□□□□□ -2.39
APOA1P02647 MIR1298-201ENST00000408783 112 ntBASIC0.11□□□□□ -2.39
APOA1P02647 RNU6-321P-201ENST00000410912 106 ntBASIC0.11□□□□□ -2.39
APOA1P02647 RNU5A-5P-201ENST00000411054 116 ntBASIC0.11□□□□□ -2.39
APOA1P02647 RNU6-1304P-201ENST00000411374 106 ntBASIC0.11□□□□□ -2.39
APOA1P02647 PCNPP5-201ENST00000452246 481 ntBASIC0.11□□□□□ -2.39
APOA1P02647 RNU11-2P-201ENST00000516898 142 ntBASIC0.11□□□□□ -2.39
APOA1P02647 RNU6-1096P-201ENST00000517089 102 ntBASIC0.11□□□□□ -2.39
APOA1P02647 AL358944.1-201ENST00000528537 144 ntBASIC0.11□□□□□ -2.39
APOA1P02647 MIR5000-201ENST00000577717 103 ntBASIC0.11□□□□□ -2.39
APOA1P02647 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.11□□□□□ -2.39
APOA1P02647 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
APOA1P02647 AL158063.1-201ENST00000615349 536 ntBASIC0.11□□□□□ -2.39
APOA1P02647 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.11□□□□□ -2.39
APOA1P02647 MIR103A1-201ENST00000362165 78 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms