Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RPS3AP3-201ENST00000411933 242 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.51□□□□□ -2.49
SPTA1P02549 MRPS10P2-201ENST00000431226 381 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 RPL23AP30-201ENST00000432419 501 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.51□□□□□ -2.49
SPTA1P02549 AL360271.2-201ENST00000447710 161 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 RNU7-12P-201ENST00000516030 62 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 RNA5SP454-201ENST00000517231 127 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 AC115990.1-201ENST00000526957 301 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.51□□□□□ -2.49
SPTA1P02549 AC008752.3-201ENST00000588113 712 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 AL445435.1-201ENST00000604232 665 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 SNORA28-201ENST00000606769 126 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 AC006441.5-201ENST00000612680 209 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 MTND4P4-201ENST00000439033 1366 ntBASIC-0.51□□□□□ -2.49
SPTA1P02549 RNU6-777P-201ENST00000364265 104 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU6-817P-201ENST00000391083 104 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 MIR1298-201ENST00000408783 112 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.52□□□□□ -2.49
SPTA1P02549 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.52□□□□□ -2.49
SPTA1P02549 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.52□□□□□ -2.49
SPTA1P02549 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU6-677P-201ENST00000516914 101 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 AP001372.4-201ENST00000524889 472 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 AP001189.2-201ENST00000527320 189 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 AP002004.2-201ENST00000531656 154 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 ADI1P3-201ENST00000549509 470 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 MIR4677-201ENST00000584153 80 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.52□□□□□ -2.49
SPTA1P02549 AC105081.1-201ENST00000617727 106 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 AC068880.4-201ENST00000623082 495 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 AC106754.1-201ENST00000562632 1513 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU4-84P-201ENST00000364200 139 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU6-549P-201ENST00000384433 107 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU6-535P-201ENST00000384722 107 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU6-376P-201ENST00000384731 106 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 AL953862.1-201ENST00000423016 168 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU6-953P-201ENST00000459154 107 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU6-64P-201ENST00000517119 105 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 Z94722.1-201ENST00000604328 474 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 MIR1264-201ENST00000616374 69 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.52□□□□□ -2.49
SPTA1P02549 SNORD38B-202ENST00000625943 69 ntBASIC-0.52□□□□□ -2.49
SPTA1P02549 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
SPTA1P02549 RNU6-811P-201ENST00000384069 107 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 MIR516B1-201ENST00000385211 90 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.53□□□□□ -2.49
SPTA1P02549 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.53□□□□□ -2.49
SPTA1P02549 MTND4P32-201ENST00000437189 1237 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 USP9YP29-201ENST00000445112 563 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 RNU7-182P-201ENST00000459009 62 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 AC107297.1-201ENST00000459991 176 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 AC010486.3-201ENST00000511602 785 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 RNU6-287P-201ENST00000516230 98 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 SNORA31.10-201ENST00000516482 106 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 RNU1-117P-201ENST00000517041 158 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.53□□□□□ -2.49
SPTA1P02549 AC013828.2-201ENST00000532487 235 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 ZNF971P-201ENST00000562068 1249 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 MIR5708-201ENST00000579723 85 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 MIR3925-201ENST00000584674 77 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 AL139286.2-201ENST00000606838 396 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 AL096861.1-201ENST00000610899 123 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 RNU6-25P-201ENST00000383873 107 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 RNU6-424P-201ENST00000384367 105 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 RNU6-29P-201ENST00000384637 107 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 RNA5SP163-201ENST00000410304 99 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 AC098592.1-201ENST00000419352 333 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 CALM2P2-201ENST00000428512 440 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 RNU6-150P-201ENST00000516237 95 ntBASIC-0.53□□□□□ -2.49
SPTA1P02549 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.53□□□□□ -2.49
SPTA1P02549 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 MIR570-201ENST00000384917 97 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 RNA5SP482-201ENST00000391269 118 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 SNORD83.1-201ENST00000411362 77 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC090960.1-201ENST00000421072 306 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 RNU7-99P-201ENST00000516271 62 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 SNORA31.14-201ENST00000516728 116 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC107934.1-201ENST00000522215 217 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC087894.1-201ENST00000538359 518 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 MIR4264-201ENST00000583520 66 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.54□□□□□ -2.5
SPTA1P02549 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.54□□□□□ -2.5
SPTA1P02549 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.54□□□□□ -2.5
SPTA1P02549 AC010205.1-201ENST00000616668 449 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC131159.1-201ENST00000621854 213 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AL157770.1-201ENST00000623049 439 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AP002782.1-201ENST00000623107 614 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 SNORD115-48-201ENST00000364764 76 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 MIR873-201ENST00000401120 77 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.54□□□□□ -2.5
SPTA1P02549 AC078809.1-201ENST00000427601 140 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.54□□□□□ -2.5
SPTA1P02549 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.54□□□□□ -2.5
SPTA1P02549 RNU6-58P-201ENST00000517143 103 ntBASIC-0.54□□□□□ -2.5
SPTA1P02549 AC010376.1-201ENST00000522101 334 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms