Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 USP9YP16-201ENST00000430287 407 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 PGBD4P5-201ENST00000445958 426 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DQB1P01920 USP9YP23-201ENST00000455085 407 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 MTND5P16-201ENST00000460269 1703 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DQB1P01920 AC010598.1-201ENST00000510378 103 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 AC046134.1-201ENST00000514454 666 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.706-201ENST00000516933 99 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 AC023157.2-201ENST00000540596 141 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 AC093023.1-201ENST00000547375 507 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 AL121579.1-201ENST00000555129 305 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DQB1P01920 MIR4438-201ENST00000585271 93 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 AL513423.1-201ENST00000621695 132 ntBASIC0.85□□□□□ -2.27
HLA-DQB1P01920 RNU6-1266P-201ENST00000362794 105 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 SNORA20B-201ENST00000384220 132 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 MIR764-201ENST00000390811 85 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 MIR190B-201ENST00000401119 79 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 MIR1277-201ENST00000408536 78 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.594-201ENST00000410373 140 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AC010469.2-201ENST00000496412 480 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AC097462.1-201ENST00000514125 324 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.655-201ENST00000515919 96 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 RNU6-718P-201ENST00000516166 105 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 Y_RNA.670-201ENST00000516255 105 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AF235103.2-201ENST00000525753 346 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 APOOP3-201ENST00000536787 586 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AC091178.2-201ENST00000584401 117 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 HSPE1P19-201ENST00000603327 295 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AL157834.3-201ENST00000615543 103 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 AC007014.2-201ENST00000615581 479 ntBASIC0.84□□□□□ -2.27
HLA-DQB1P01920 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
HLA-DQB1P01920 MIR410-201ENST00000362222 80 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 Y_RNA.86-201ENST00000363020 111 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 RNU1-22P-201ENST00000363334 158 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 RNU6-505P-201ENST00000384427 107 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 AL139396.1-201ENST00000421137 167 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 U8.22-201ENST00000459141 133 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 RNU7-94P-201ENST00000459576 63 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 AC092991.1-201ENST00000477176 376 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 AC069439.1-201ENST00000494739 167 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 RNU6-1016P-201ENST00000516689 94 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 RN7SKP88-201ENST00000516847 250 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 AP002001.1-203ENST00000534002 267 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DQB1P01920 AC090617.3-201ENST00000573670 475 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 7SK.8-201ENST00000612110 250 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 7SK.11-201ENST00000615477 250 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 AC073349.3-201ENST00000617616 186 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DQB1P01920 7SK.13-201ENST00000622040 250 ntBASIC0.83□□□□□ -2.28
HLA-DQB1P01920 Y_RNA.6-201ENST00000362350 114 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 RNU6-593P-201ENST00000364716 112 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 Y_RNA.364-201ENST00000365532 101 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 RNU6-1264P-201ENST00000383891 107 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 Y_RNA.557-201ENST00000384680 107 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 MIR660-201ENST00000385235 97 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 RNU6-510P-201ENST00000391239 108 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AL034345.1-201ENST00000407768 123 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 MTND3P8-201ENST00000412909 339 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DQB1P01920 MTCO3P19-201ENST00000415864 321 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AP1B1P2-201ENST00000416196 106 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AC108667.1-201ENST00000428618 249 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.82□□□□□ -2.28
HLA-DQB1P01920 snoU13.23-201ENST00000458863 104 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AC087343.1-201ENST00000477341 475 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 RPS27P22-201ENST00000478056 241 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.82□□□□□ -2.28
HLA-DQB1P01920 RPS23P4-201ENST00000487908 423 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.82□□□□□ -2.28
HLA-DQB1P01920 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 CYCSP23-201ENST00000519781 313 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AC027419.1-201ENST00000522976 328 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.82□□□□□ -2.28
HLA-DQB1P01920 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AL162424.1-201ENST00000602325 221 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AL021879.1-201ENST00000611756 288 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AC093913.1-201ENST00000614178 329 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AC027335.2-201ENST00000624030 375 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 MIR6079-201ENST00000635807 62 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 AC073869.6-201ENST00000640656 341 ntBASIC0.82□□□□□ -2.28
HLA-DQB1P01920 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HLA-DQB1P01920 RNA5SP361-201ENST00000362686 118 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 Y_RNA.404-201ENST00000383978 102 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 MIR23A-201ENST00000385245 73 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 MIR653-201ENST00000385279 96 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 RNU6-1050P-201ENST00000410388 107 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 AC074085.1-201ENST00000413598 418 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 RAB28P5-201ENST00000427490 651 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 RPS3AP52-201ENST00000435639 297 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 DYNLT3P2-201ENST00000442517 295 ntBASIC0.81□□□□□ -2.28
HLA-DQB1P01920 OR9P1P-201ENST00000496431 281 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms