Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 Y_RNA.706-201ENST00000516933 99 ntBASIC1.12□□□□□ -2.23
MBD3O95983 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
MBD3O95983 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.12□□□□□ -2.23
MBD3O95983 RNU6-727P-201ENST00000363592 107 ntBASIC1.11□□□□□ -2.23
MBD3O95983 AL356776.1-201ENST00000406574 447 ntBASIC1.11□□□□□ -2.23
MBD3O95983 RNU6-1148P-201ENST00000410992 104 ntBASIC1.11□□□□□ -2.23
MBD3O95983 AL139396.1-201ENST00000421137 167 ntBASIC1.11□□□□□ -2.23
MBD3O95983 MTND3P23-201ENST00000431980 347 ntBASIC1.11□□□□□ -2.23
MBD3O95983 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.11□□□□□ -2.23
MBD3O95983 MIR5701-3-201ENST00000578890 82 ntBASIC1.11□□□□□ -2.23
MBD3O95983 MIR5701-1-201ENST00000585138 82 ntBASIC1.11□□□□□ -2.23
MBD3O95983 MIR4438-201ENST00000585271 93 ntBASIC1.11□□□□□ -2.23
MBD3O95983 MIR5701-2-201ENST00000615634 82 ntBASIC1.11□□□□□ -2.23
MBD3O95983 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
MBD3O95983 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
MBD3O95983 Y_RNA.295-201ENST00000364918 102 ntBASIC1.1□□□□□ -2.23
MBD3O95983 RNU6-306P-201ENST00000384617 107 ntBASIC1.1□□□□□ -2.23
MBD3O95983 MIR660-201ENST00000385235 97 ntBASIC1.1□□□□□ -2.23
MBD3O95983 MIR653-201ENST00000385279 96 ntBASIC1.1□□□□□ -2.23
MBD3O95983 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MBD3O95983 MTCYBP4-201ENST00000401524 249 ntBASIC1.1□□□□□ -2.23
MBD3O95983 RNU7-28P-201ENST00000516759 62 ntBASIC1.1□□□□□ -2.23
MBD3O95983 AC091144.1-201ENST00000519573 138 ntBASIC1.1□□□□□ -2.23
MBD3O95983 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.1□□□□□ -2.23
MBD3O95983 MIR3662-201ENST00000637030 95 ntBASIC1.1□□□□□ -2.23
MBD3O95983 AL391987.6-201ENST00000305671 199 ntBASIC1.09□□□□□ -2.23
MBD3O95983 MIR410-201ENST00000362222 80 ntBASIC1.09□□□□□ -2.23
MBD3O95983 RNU1-22P-201ENST00000363334 158 ntBASIC1.09□□□□□ -2.23
MBD3O95983 RNU6-593P-201ENST00000364716 112 ntBASIC1.09□□□□□ -2.23
MBD3O95983 RNU6-1264P-201ENST00000383891 107 ntBASIC1.09□□□□□ -2.23
MBD3O95983 RNU6-842P-201ENST00000384269 107 ntBASIC1.09□□□□□ -2.23
MBD3O95983 SNORA12.1-201ENST00000390873 148 ntBASIC1.09□□□□□ -2.23
MBD3O95983 BTF3P4-201ENST00000418852 495 ntBASIC1.09□□□□□ -2.23
MBD3O95983 USP9YP16-201ENST00000430287 407 ntBASIC1.09□□□□□ -2.23
MBD3O95983 USP9YP30-201ENST00000430729 455 ntBASIC1.09□□□□□ -2.23
MBD3O95983 USP9YP23-201ENST00000455085 407 ntBASIC1.09□□□□□ -2.23
MBD3O95983 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.09□□□□□ -2.23
MBD3O95983 AC074133.1-201ENST00000515696 183 ntBASIC1.09□□□□□ -2.23
MBD3O95983 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
MBD3O95983 MIR5695-201ENST00000579717 85 ntBASIC1.09□□□□□ -2.23
MBD3O95983 AL157834.3-201ENST00000615543 103 ntBASIC1.09□□□□□ -2.23
MBD3O95983 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.09□□□□□ -2.23
MBD3O95983 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
MBD3O95983 RNU6-1054P-201ENST00000411293 104 ntBASIC1.08□□□□□ -2.24
MBD3O95983 AC016907.1-201ENST00000419483 435 ntBASIC1.08□□□□□ -2.24
MBD3O95983 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.08□□□□□ -2.24
MBD3O95983 RAB28P5-201ENST00000427490 651 ntBASIC1.08□□□□□ -2.24
MBD3O95983 EIF1P2-201ENST00000428233 350 ntBASIC1.08□□□□□ -2.24
MBD3O95983 AC010469.2-201ENST00000496412 480 ntBASIC1.08□□□□□ -2.24
MBD3O95983 RNU6-165P-201ENST00000517170 99 ntBASIC1.08□□□□□ -2.24
MBD3O95983 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
MBD3O95983 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.08□□□□□ -2.24
MBD3O95983 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.08□□□□□ -2.24
MBD3O95983 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
MBD3O95983 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
MBD3O95983 MIR3688-2-201ENST00000636963 87 ntBASIC1.08□□□□□ -2.24
MBD3O95983 AC100810.6-201ENST00000638068 285 ntBASIC1.08□□□□□ -2.24
MBD3O95983 Y_RNA.3-201ENST00000362331 103 ntBASIC1.07□□□□□ -2.24
MBD3O95983 RNU4-12P-201ENST00000365233 139 ntBASIC1.07□□□□□ -2.24
MBD3O95983 RNU6-1145P-201ENST00000384246 107 ntBASIC1.07□□□□□ -2.24
MBD3O95983 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
MBD3O95983 MIR329-1-201ENST00000385028 80 ntBASIC1.07□□□□□ -2.24
MBD3O95983 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
MBD3O95983 RNU6-510P-201ENST00000391239 108 ntBASIC1.07□□□□□ -2.24
MBD3O95983 MIR190B-201ENST00000401119 79 ntBASIC1.07□□□□□ -2.24
MBD3O95983 AP1B1P2-201ENST00000416196 106 ntBASIC1.07□□□□□ -2.24
MBD3O95983 AL445305.1-201ENST00000432577 575 ntBASIC1.07□□□□□ -2.24
MBD3O95983 UBE2V1P7-201ENST00000446395 340 ntBASIC1.07□□□□□ -2.24
MBD3O95983 RPS27P22-201ENST00000478056 241 ntBASIC1.07□□□□□ -2.24
MBD3O95983 AC097462.1-201ENST00000514125 324 ntBASIC1.07□□□□□ -2.24
MBD3O95983 AC093023.1-201ENST00000547375 507 ntBASIC1.07□□□□□ -2.24
MBD3O95983 RPL21P9-201ENST00000556149 474 ntBASIC1.07□□□□□ -2.24
MBD3O95983 GHRLOS.1-201ENST00000610995 70 ntBASIC1.07□□□□□ -2.24
MBD3O95983 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
MBD3O95983 AL021879.1-201ENST00000611756 288 ntBASIC1.07□□□□□ -2.24
MBD3O95983 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.07□□□□□ -2.24
MBD3O95983 AC090517.2-201ENST00000614966 680 ntBASIC1.07□□□□□ -2.24
MBD3O95983 MIR6128-201ENST00000615528 109 ntBASIC1.07□□□□□ -2.24
MBD3O95983 SNORD3E-202ENST00000627253 216 ntBASIC1.07□□□□□ -2.24
MBD3O95983 MIR6079-201ENST00000635807 62 ntBASIC1.07□□□□□ -2.24
MBD3O95983 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
MBD3O95983 SNORD114-7-201ENST00000362520 77 ntBASIC1.06□□□□□ -2.24
MBD3O95983 Y_RNA.106-201ENST00000363189 100 ntBASIC1.06□□□□□ -2.24
MBD3O95983 RNU4-76P-201ENST00000364509 141 ntBASIC1.06□□□□□ -2.24
MBD3O95983 Y_RNA.364-201ENST00000365532 101 ntBASIC1.06□□□□□ -2.24
MBD3O95983 Y_RNA.453-201ENST00000384223 109 ntBASIC1.06□□□□□ -2.24
MBD3O95983 RNU6-505P-201ENST00000384427 107 ntBASIC1.06□□□□□ -2.24
MBD3O95983 SNORD116-4-201ENST00000384733 96 ntBASIC1.06□□□□□ -2.24
MBD3O95983 HSPE1P13-201ENST00000451143 297 ntBASIC1.06□□□□□ -2.24
MBD3O95983 SUMO1P2-201ENST00000452524 304 ntBASIC1.06□□□□□ -2.24
MBD3O95983 RNU6-329P-201ENST00000459618 107 ntBASIC1.06□□□□□ -2.24
MBD3O95983 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
MBD3O95983 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.06□□□□□ -2.24
MBD3O95983 MTND5P5-201ENST00000503764 376 ntBASIC1.06□□□□□ -2.24
MBD3O95983 RNU6-341P-201ENST00000516973 96 ntBASIC1.06□□□□□ -2.24
MBD3O95983 AC105029.1-201ENST00000520250 669 ntBASIC1.06□□□□□ -2.24
MBD3O95983 AC018462.2-201ENST00000605375 395 ntBASIC1.06□□□□□ -2.24
MBD3O95983 AL359821.1-201ENST00000605519 182 ntBASIC1.06□□□□□ -2.24
MBD3O95983 AC012557.2-201ENST00000605919 418 ntBASIC1.06□□□□□ -2.24
MBD3O95983 AL133216.2-202ENST00000634512 349 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms