Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC093303.1-201ENST00000514549 295 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 RNU6-1198P-201ENST00000516904 67 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 Y_RNA.706-201ENST00000516933 99 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 RNU6-902P-201ENST00000517212 91 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC091144.1-201ENST00000519573 138 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.13□□□□□ -2.23
CTDNEP1O95476 APOOP3-201ENST00000536787 586 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC005668.1-201ENST00000571142 476 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC100812.1-201ENST00000607622 580 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC099654.5-201ENST00000636479 350 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.13□□□□□ -2.23
CTDNEP1O95476 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CTDNEP1O95476 AC010615.1-201ENST00000594254 1764 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 RNA5SP361-201ENST00000362686 118 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 U3.8-201ENST00000363675 217 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 RNU6-1188P-201ENST00000363795 107 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 Y_RNA.179-201ENST00000363844 90 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 RNU6-271P-201ENST00000363858 105 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 SNORA63D-201ENST00000364359 132 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 MIR329-1-201ENST00000385028 80 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 Y_RNA.646-201ENST00000410980 101 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 RNU6-370P-201ENST00000411008 104 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.12□□□□□ -2.23
CTDNEP1O95476 AC114982.1-201ENST00000469402 321 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 PRDX4P1-201ENST00000507189 574 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 AC093023.1-201ENST00000547375 507 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 AC010999.1-201ENST00000611856 324 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 AC095038.3-201ENST00000634439 195 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 MTND5P35-201ENST00000557537 1720 ntBASIC1.12□□□□□ -2.23
CTDNEP1O95476 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.12□□□□□ -2.23
CTDNEP1O95476 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
CTDNEP1O95476 RNU6-414P-201ENST00000363705 104 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 RNU6-1019P-201ENST00000364424 107 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 Y_RNA.364-201ENST00000365532 101 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 RNU6-310P-201ENST00000384655 107 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CTDNEP1O95476 MIR1267-201ENST00000408723 78 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 RNU6-321P-201ENST00000410912 106 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 ELOCP21-201ENST00000412558 336 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 CST2P1-201ENST00000425770 87 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 USP9YP16-201ENST00000430287 407 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 AC098614.3-201ENST00000438957 440 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 HSPE1P9-201ENST00000440046 311 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 USP9YP23-201ENST00000455085 407 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 MTCO3P10-201ENST00000455912 772 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.11□□□□□ -2.23
CTDNEP1O95476 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 RNU6-277P-201ENST00000516272 106 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 RNU7-128P-201ENST00000517247 62 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CTDNEP1O95476 SNORA77B-201ENST00000578179 125 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CTDNEP1O95476 7SK.7-201ENST00000603504 247 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 AC069114.2-201ENST00000604699 304 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 MIR1244-1-201ENST00000612829 85 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CTDNEP1O95476 AC092794.2-201ENST00000620933 563 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 AL359697.1-201ENST00000624879 587 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 MIR1244-3-201ENST00000635744 85 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 MIR1244-2-201ENST00000636449 85 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 MIR1244-4-202ENST00000636813 85 ntBASIC1.11□□□□□ -2.23
CTDNEP1O95476 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CTDNEP1O95476 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CTDNEP1O95476 RNU6-280P-201ENST00000364145 104 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 RNU6-99P-201ENST00000364721 107 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 SNORA4.2-201ENST00000365313 147 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 Y_RNA.358-201ENST00000365491 99 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 RNU6-1145P-201ENST00000384246 107 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 RNU6-318P-201ENST00000384283 103 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 MIR520A-201ENST00000384862 85 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 MTCYBP10-201ENST00000424905 650 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 AL606517.2-201ENST00000442855 241 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 MTND4P18-201ENST00000447010 465 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 NDUFB4P10-201ENST00000452541 359 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.1□□□□□ -2.23
CTDNEP1O95476 Y_RNA.635-201ENST00000459041 101 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 RNU7-87P-201ENST00000459343 62 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 RPS26P55-201ENST00000471178 356 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 AC091951.2-201ENST00000500762 203 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 HMGN1P13-201ENST00000505795 138 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.1□□□□□ -2.23
CTDNEP1O95476 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.1□□□□□ -2.23
CTDNEP1O95476 AL121579.1-201ENST00000555129 305 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 AC090617.3-201ENST00000573670 475 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 PISRT1.1-201ENST00000616930 107 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 AL121890.5-201ENST00000620848 304 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 MIR6767-201ENST00000637302 66 ntBASIC1.1□□□□□ -2.23
CTDNEP1O95476 SNORA72.1-201ENST00000363485 129 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 SNORD116-29-201ENST00000384516 83 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 RNU6-700P-201ENST00000391043 107 ntBASIC1.09□□□□□ -2.23
CTDNEP1O95476 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.09□□□□□ -2.23
CTDNEP1O95476 AC005002.2-201ENST00000438228 269 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms