Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 RNU6-234P-201ENST00000365229 104 ntBASIC3.34□□□□□ -1.87
ALX3O95076 AC007064.1-201ENST00000412238 351 ntBASIC3.34□□□□□ -1.87
ALX3O95076 RPS3AP1-201ENST00000413190 320 ntBASIC3.34□□□□□ -1.87
ALX3O95076 AC016909.1-201ENST00000415916 166 ntBASIC3.34□□□□□ -1.87
ALX3O95076 AC009969.1-201ENST00000438726 172 ntBASIC3.34□□□□□ -1.87
ALX3O95076 RNU2-58P-201ENST00000516403 183 ntBASIC3.34□□□□□ -1.87
ALX3O95076 Y_RNA.685-201ENST00000516532 108 ntBASIC3.34□□□□□ -1.87
ALX3O95076 AP000867.2-201ENST00000532468 320 ntBASIC3.34□□□□□ -1.87
ALX3O95076 AL442128.1-201ENST00000615151 90 ntBASIC3.34□□□□□ -1.87
ALX3O95076 AL035470.1-201ENST00000622571 220 ntBASIC3.34□□□□□ -1.87
ALX3O95076 AL161912.2-201ENST00000565707 3007 ntBASIC3.34□□□□□ -1.88
ALX3O95076 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ALX3O95076 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
ALX3O95076 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALX3O95076 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALX3O95076 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALX3O95076 AL589743.1-201ENST00000551932 2712 ntBASIC3.33□□□□□ -1.88
ALX3O95076 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
ALX3O95076 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALX3O95076 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
ALX3O95076 SNORD24-201ENST00000383884 75 ntBASIC3.33□□□□□ -1.88
ALX3O95076 Y_RNA.500-201ENST00000384466 111 ntBASIC3.33□□□□□ -1.88
ALX3O95076 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.33□□□□□ -1.88
ALX3O95076 AC080013.2-201ENST00000460866 323 ntBASIC3.33□□□□□ -1.88
ALX3O95076 RPS27P22-201ENST00000478056 241 ntBASIC3.33□□□□□ -1.88
ALX3O95076 AC021205.2-201ENST00000480069 347 ntBASIC3.33□□□□□ -1.88
ALX3O95076 RPL23AP94-201ENST00000512518 302 ntBASIC3.33□□□□□ -1.88
ALX3O95076 AC097462.1-201ENST00000514125 324 ntBASIC3.33□□□□□ -1.88
ALX3O95076 RNA5SP164-201ENST00000516533 110 ntBASIC3.33□□□□□ -1.88
ALX3O95076 RNU2-34P-201ENST00000516534 121 ntBASIC3.33□□□□□ -1.88
ALX3O95076 SCARNA15-202ENST00000516881 127 ntBASIC3.33□□□□□ -1.88
ALX3O95076 RNA5SP179-201ENST00000517284 121 ntBASIC3.33□□□□□ -1.88
ALX3O95076 AC068657.1-201ENST00000520807 306 ntBASIC3.33□□□□□ -1.88
ALX3O95076 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.33□□□□□ -1.88
ALX3O95076 MIR3117-201ENST00000584034 78 ntBASIC3.33□□□□□ -1.88
ALX3O95076 AC091167.4-201ENST00000605079 184 ntBASIC3.33□□□□□ -1.88
ALX3O95076 AC002076.2-201ENST00000617362 122 ntBASIC3.33□□□□□ -1.88
ALX3O95076 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
ALX3O95076 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALX3O95076 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALX3O95076 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.33□□□□□ -1.88
ALX3O95076 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.33□□□□□ -1.88
ALX3O95076 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.33□□□□□ -1.88
ALX3O95076 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALX3O95076 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ALX3O95076 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALX3O95076 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ALX3O95076 Y_RNA.78-201ENST00000362970 110 ntBASIC3.32□□□□□ -1.88
ALX3O95076 RNU6-888P-201ENST00000363010 101 ntBASIC3.32□□□□□ -1.88
ALX3O95076 Y_RNA.198-201ENST00000364013 98 ntBASIC3.32□□□□□ -1.88
ALX3O95076 RNA5SP72-201ENST00000364442 117 ntBASIC3.32□□□□□ -1.88
ALX3O95076 RNA5SP173-201ENST00000364857 136 ntBASIC3.32□□□□□ -1.88
ALX3O95076 Y_RNA.366-201ENST00000365540 102 ntBASIC3.32□□□□□ -1.88
ALX3O95076 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.32□□□□□ -1.88
ALX3O95076 MIR449C-201ENST00000516047 92 ntBASIC3.32□□□□□ -1.88
ALX3O95076 Y_RNA.818-201ENST00000618813 71 ntBASIC3.32□□□□□ -1.88
ALX3O95076 AC012442.3-202ENST00000636742 206 ntBASIC3.32□□□□□ -1.88
ALX3O95076 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALX3O95076 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.32□□□□□ -1.88
ALX3O95076 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ALX3O95076 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ALX3O95076 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALX3O95076 RNU6-283P-201ENST00000364788 107 ntBASIC3.31□□□□□ -1.88
ALX3O95076 SNORD61-201ENST00000384252 73 ntBASIC3.31□□□□□ -1.88
ALX3O95076 RNU6-820P-201ENST00000384273 107 ntBASIC3.31□□□□□ -1.88
ALX3O95076 MIR591-201ENST00000385290 95 ntBASIC3.31□□□□□ -1.88
ALX3O95076 HSPE1P26-201ENST00000405341 275 ntBASIC3.31□□□□□ -1.88
ALX3O95076 TRIAP1P1-201ENST00000427062 225 ntBASIC3.31□□□□□ -1.88
ALX3O95076 RN7SL807P-201ENST00000470923 297 ntBASIC3.31□□□□□ -1.88
ALX3O95076 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.31□□□□□ -1.88
ALX3O95076 TRBV12-2-201ENST00000489763 344 ntBASIC3.31□□□□□ -1.88
ALX3O95076 NDUFA4P2-201ENST00000489989 244 ntBASIC3.31□□□□□ -1.88
ALX3O95076 RPS26P48-201ENST00000491713 339 ntBASIC3.31□□□□□ -1.88
ALX3O95076 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.31□□□□□ -1.88
ALX3O95076 MIR5685-201ENST00000579080 79 ntBASIC3.31□□□□□ -1.88
ALX3O95076 JPX_2.1-201ENST00000614161 69 ntBASIC3.31□□□□□ -1.88
ALX3O95076 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.31□□□□□ -1.88
ALX3O95076 U6.73-201ENST00000619194 103 ntBASIC3.31□□□□□ -1.88
ALX3O95076 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALX3O95076 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALX3O95076 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ALX3O95076 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ALX3O95076 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ALX3O95076 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
ALX3O95076 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
ALX3O95076 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ALX3O95076 RNA5SP295-201ENST00000362655 121 ntBASIC3.3□□□□□ -1.88
ALX3O95076 RNY4P6-201ENST00000363667 96 ntBASIC3.3□□□□□ -1.88
ALX3O95076 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ALX3O95076 RNU2-32P-201ENST00000411193 191 ntBASIC3.3□□□□□ -1.88
ALX3O95076 RNU6-1149P-201ENST00000516810 97 ntBASIC3.3□□□□□ -1.88
ALX3O95076 RNU7-172P-201ENST00000517125 64 ntBASIC3.3□□□□□ -1.88
ALX3O95076 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
ALX3O95076 MIR5009-201ENST00000578736 100 ntBASIC3.3□□□□□ -1.88
ALX3O95076 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.3□□□□□ -1.88
ALX3O95076 MIR5195-201ENST00000583555 115 ntBASIC3.3□□□□□ -1.88
ALX3O95076 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.3□□□□□ -1.88
ALX3O95076 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ALX3O95076 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.3□□□□□ -1.88
ALX3O95076 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms