Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC009779.6-201ENST00000603972 165 ntBASIC2.55□□□□□ -2
VPS4BO75351 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.55□□□□□ -2
VPS4BO75351 snoZ196.1-201ENST00000625269 89 ntBASIC2.55□□□□□ -2
VPS4BO75351 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
VPS4BO75351 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
VPS4BO75351 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
VPS4BO75351 SNORA25.1-201ENST00000362326 128 ntBASIC2.54□□□□□ -2
VPS4BO75351 SNORD27-201ENST00000363981 72 ntBASIC2.54□□□□□ -2
VPS4BO75351 SNORA25.6-201ENST00000364121 118 ntBASIC2.54□□□□□ -2
VPS4BO75351 RNU6-338P-201ENST00000383888 105 ntBASIC2.54□□□□□ -2
VPS4BO75351 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.54□□□□□ -2
VPS4BO75351 AL137159.1-201ENST00000452808 512 ntBASIC2.54□□□□□ -2
VPS4BO75351 RNU4-71P-201ENST00000516258 113 ntBASIC2.54□□□□□ -2
VPS4BO75351 RNU6-191P-201ENST00000516295 94 ntBASIC2.54□□□□□ -2
VPS4BO75351 RNU6-948P-201ENST00000516374 107 ntBASIC2.54□□□□□ -2
VPS4BO75351 RNA5SP490-201ENST00000517141 136 ntBASIC2.54□□□□□ -2
VPS4BO75351 AC087441.2-201ENST00000529141 262 ntBASIC2.54□□□□□ -2
VPS4BO75351 NDUFA5P6-201ENST00000542110 379 ntBASIC2.54□□□□□ -2
VPS4BO75351 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.54□□□□□ -2
VPS4BO75351 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.54□□□□□ -2
VPS4BO75351 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
VPS4BO75351 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.54□□□□□ -2
VPS4BO75351 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.54□□□□□ -2
VPS4BO75351 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
VPS4BO75351 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
VPS4BO75351 AL159152.1-201ENST00000635019 2587 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.82-201ENST00000363000 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.92-201ENST00000363043 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.217-201ENST00000364214 105 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.235-201ENST00000364412 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.306-201ENST00000365015 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.312-201ENST00000365089 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.322-201ENST00000365151 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.329-201ENST00000365209 107 ntBASIC2.53□□□□□ -2
VPS4BO75351 SNORA25B-201ENST00000365507 128 ntBASIC2.53□□□□□ -2
VPS4BO75351 RNU6-1235P-201ENST00000384559 107 ntBASIC2.53□□□□□ -2
VPS4BO75351 AL031003.1-201ENST00000404229 172 ntBASIC2.53□□□□□ -2
VPS4BO75351 RNU2-61P-201ENST00000411069 191 ntBASIC2.53□□□□□ -2
VPS4BO75351 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.53□□□□□ -2
VPS4BO75351 AC123900.1-201ENST00000420390 96 ntBASIC2.53□□□□□ -2
VPS4BO75351 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.53□□□□□ -2
VPS4BO75351 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.650-201ENST00000459002 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.641-201ENST00000459414 105 ntBASIC2.53□□□□□ -2
VPS4BO75351 RNU6-498P-201ENST00000459468 107 ntBASIC2.53□□□□□ -2
VPS4BO75351 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.777-201ENST00000516982 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 RPL21P9-201ENST00000556149 474 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.771-201ENST00000598668 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 DEFB117-201ENST00000602356 141 ntBASIC2.53□□□□□ -2
VPS4BO75351 Y_RNA.789-201ENST00000622480 102 ntBASIC2.53□□□□□ -2
VPS4BO75351 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
VPS4BO75351 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS4BO75351 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS4BO75351 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS4BO75351 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS4BO75351 RNU4-80P-201ENST00000363200 141 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 RNU6-740P-201ENST00000364734 105 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 RN7SKP192-201ENST00000411291 327 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 AL139156.1-201ENST00000412785 841 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 AC104389.3-201ENST00000445629 235 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 AL357134.1-201ENST00000445848 426 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 snoU13.15-201ENST00000459407 104 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 AC010531.2-201ENST00000465012 153 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS4BO75351 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.52□□□□□ -2.01
VPS4BO75351 AL162424.1-201ENST00000602325 221 ntBASIC2.52□□□□□ -2.01
VPS4BO75351 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
VPS4BO75351 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS4BO75351 Y_RNA.76-201ENST00000362931 109 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 Y_RNA.122-201ENST00000363331 96 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 RNU6-438P-201ENST00000365561 103 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 RNU1-138P-201ENST00000384093 164 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 RNU6-514P-201ENST00000384208 107 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 Y_RNA.515-201ENST00000384535 112 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 RNU6-1248P-201ENST00000391096 64 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
VPS4BO75351 AC016717.1-201ENST00000448918 286 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 SNORD2.1-201ENST00000458762 69 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 RNU6-667P-201ENST00000517186 102 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 AC025647.1-201ENST00000517879 253 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS4BO75351 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS4BO75351 MIR3145-201ENST00000580727 82 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 AC011921.3-201ENST00000605540 361 ntBASIC2.51□□□□□ -2.01
VPS4BO75351 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS4BO75351 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VPS4BO75351 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS4BO75351 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
VPS4BO75351 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 Y_RNA.54-201ENST00000362766 105 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 Y_RNA.269-201ENST00000364685 89 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 RNU6-418P-201ENST00000384035 107 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VPS4BO75351 AL355796.1-201ENST00000406706 323 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 SRIP3-201ENST00000413200 219 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 AL139109.1-201ENST00000455491 297 ntBASIC2.5□□□□□ -2.01
VPS4BO75351 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms