Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.52□□□□□ -2.33
SHOX2O60902 SNORD115-8-201ENST00000363856 82 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 Y_RNA.185-201ENST00000363894 100 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 SNORD115-38-201ENST00000365037 82 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.51□□□□□ -2.33
SHOX2O60902 SNORD116-13-201ENST00000384408 92 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 RNA5SP299-201ENST00000391203 116 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 AL355796.1-201ENST00000406706 323 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 MIR1185-2-201ENST00000408687 86 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 RNA5SP504-201ENST00000410676 117 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 AL022718.1-201ENST00000412004 84 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.51□□□□□ -2.33
SHOX2O60902 MTCYBP8-201ENST00000422855 651 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 AC073415.1-201ENST00000449240 153 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 MTCO2P18-201ENST00000457151 658 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.51□□□□□ -2.33
SHOX2O60902 RNU6-759P-201ENST00000516740 103 ntBASIC0.51□□□□□ -2.33
SHOX2O60902 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.51□□□□□ -2.33
SHOX2O60902 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.51□□□□□ -2.33
SHOX2O60902 RNU4-12P-201ENST00000365233 139 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 RNU6-424P-201ENST00000384367 105 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 MIR562-201ENST00000384894 95 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 RNU6-700P-201ENST00000391043 107 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 AL365203.2-201ENST00000423444 196 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 RPEP5-201ENST00000441137 268 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.5□□□□□ -2.33
SHOX2O60902 AC104692.1-201ENST00000472406 90 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 CCDC34P1-201ENST00000507441 517 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 RNU6-917P-201ENST00000516294 104 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 RNU7-28P-201ENST00000516759 62 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 IGLVI-20-201ENST00000519296 130 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 AC104576.1-201ENST00000524225 88 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 MIR4514-201ENST00000581410 57 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 AC103705.1-201ENST00000619013 241 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 AC006435.5-201ENST00000624486 112 ntBASIC0.5□□□□□ -2.33
SHOX2O60902 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 RNU6-933P-201ENST00000384424 107 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 MT-TH-201ENST00000387441 69 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 Y_RNA.610-201ENST00000410681 103 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.49□□□□□ -2.33
SHOX2O60902 AL359672.1-201ENST00000442302 409 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 AC245047.8-201ENST00000456455 284 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.49□□□□□ -2.33
SHOX2O60902 LINC01399-202ENST00000458450 244 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.49□□□□□ -2.33
SHOX2O60902 AP002001.1-203ENST00000534002 267 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 MIR3915-201ENST00000578518 97 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 MIR4424-201ENST00000585257 86 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 AC087683.1-201ENST00000591187 441 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 PRELID3BP2-201ENST00000605362 201 ntBASIC0.49□□□□□ -2.33
SHOX2O60902 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
SHOX2O60902 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 RNU5A-6P-201ENST00000384136 116 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 RNU6-163P-201ENST00000384396 106 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 MIR10B-201ENST00000385011 110 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.48□□□□□ -2.33
SHOX2O60902 MTND1P27-201ENST00000451117 902 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 AL049830.1-201ENST00000468034 425 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 RPL23AP75-201ENST00000491601 451 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 MTCO1P29-201ENST00000496868 288 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.48□□□□□ -2.33
SHOX2O60902 Y_RNA.654-201ENST00000497848 106 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
SHOX2O60902 AC113410.1-201ENST00000505029 247 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.48□□□□□ -2.33
SHOX2O60902 AL157687.1-201ENST00000554853 619 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 AC027449.1-201ENST00000608890 407 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.48□□□□□ -2.33
SHOX2O60902 AC007494.3-201ENST00000624660 743 ntBASIC0.48□□□□□ -2.33
SHOX2O60902 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SHOX2O60902 Y_RNA.159-201ENST00000363674 87 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 Y_RNA.265-201ENST00000364677 108 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 RNU6-214P-201ENST00000384130 107 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 MIR521-1-201ENST00000384902 87 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 SNORA75.2-201ENST00000391138 150 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 SNORA75.3-201ENST00000391231 150 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 RNU6-325P-201ENST00000411132 105 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 MTND2P18-201ENST00000419962 1030 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.47□□□□□ -2.33
SHOX2O60902 MRPS10P1-201ENST00000448483 130 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.47□□□□□ -2.33
SHOX2O60902 TPTE2P5-203ENST00000458118 728 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 AC098869.1-201ENST00000481627 292 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.47□□□□□ -2.33
SHOX2O60902 AC091133.4-201ENST00000511142 308 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 MTCO2P4-201ENST00000517968 247 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 AP003327.1-201ENST00000529684 127 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.47□□□□□ -2.33
SHOX2O60902 CPDP1-201ENST00000579660 283 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 MIR4438-201ENST00000585271 93 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 AL357078.3-201ENST00000607528 618 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 AC004832.4-201ENST00000608952 331 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 AL360219.1-201ENST00000610230 366 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
SHOX2O60902 AC068137.4-201ENST00000638485 296 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 AC023934.1-201ENST00000574529 2389 ntBASIC0.47□□□□□ -2.33
SHOX2O60902 RNU5F-3P-201ENST00000363767 117 ntBASIC0.46□□□□□ -2.34
SHOX2O60902 MIR450B-201ENST00000401182 78 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms