Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.01□□□□□ -2.09
ZIC3O60481 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ZIC3O60481 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
ZIC3O60481 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
ZIC3O60481 Y_RNA.84-201ENST00000363011 104 ntBASIC2□□□□□ -2.09
ZIC3O60481 SNORA3A-201ENST00000364113 130 ntBASIC2□□□□□ -2.09
ZIC3O60481 RNA5SP493-201ENST00000364115 91 ntBASIC2□□□□□ -2.09
ZIC3O60481 SNORD115-30-201ENST00000364117 82 ntBASIC2□□□□□ -2.09
ZIC3O60481 Y_RNA.331-201ENST00000365267 102 ntBASIC2□□□□□ -2.09
ZIC3O60481 RNU6-472P-201ENST00000384299 107 ntBASIC2□□□□□ -2.09
ZIC3O60481 RNU6-463P-201ENST00000384340 107 ntBASIC2□□□□□ -2.09
ZIC3O60481 MIR29C-201ENST00000385231 88 ntBASIC2□□□□□ -2.09
ZIC3O60481 AC008134.1-201ENST00000420943 193 ntBASIC2□□□□□ -2.09
ZIC3O60481 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2□□□□□ -2.09
ZIC3O60481 OOSP1P1-201ENST00000423265 274 ntBASIC2□□□□□ -2.09
ZIC3O60481 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2□□□□□ -2.09
ZIC3O60481 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
ZIC3O60481 IPO7P1-201ENST00000442031 636 ntBASIC2□□□□□ -2.09
ZIC3O60481 RPL23AP3-201ENST00000453844 468 ntBASIC2□□□□□ -2.09
ZIC3O60481 RNU6-155P-201ENST00000516347 100 ntBASIC2□□□□□ -2.09
ZIC3O60481 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
ZIC3O60481 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
ZIC3O60481 MIR1273D-201ENST00000577266 86 ntBASIC2□□□□□ -2.09
ZIC3O60481 MIR3169-201ENST00000578032 83 ntBASIC2□□□□□ -2.09
ZIC3O60481 MIR4503-201ENST00000582187 83 ntBASIC2□□□□□ -2.09
ZIC3O60481 MIR3124-201ENST00000582636 67 ntBASIC2□□□□□ -2.09
ZIC3O60481 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2□□□□□ -2.09
ZIC3O60481 U2.15-201ENST00000611544 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.16-201ENST00000613119 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2□□□□□ -2.09
ZIC3O60481 U2.12-201ENST00000613778 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.20-201ENST00000613956 192 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.9-201ENST00000615427 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.11-201ENST00000616345 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.2-201ENST00000616535 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.3-201ENST00000617785 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.19-201ENST00000618602 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 RNU2-1-201ENST00000618664 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.6-201ENST00000619225 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.5-201ENST00000619465 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 U2.10-201ENST00000620268 191 ntBASIC2□□□□□ -2.09
ZIC3O60481 AC006001.4-201ENST00000622243 395 ntBASIC2□□□□□ -2.09
ZIC3O60481 AC127459.3-201ENST00000624328 466 ntBASIC2□□□□□ -2.09
ZIC3O60481 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 RNU6-1240P-201ENST00000365155 104 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 SNORA70B-201ENST00000384210 135 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 RNU6-196P-201ENST00000384315 107 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 Y_RNA.541-201ENST00000384640 113 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 RNU6-21P-201ENST00000384710 107 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 MT-TW-201ENST00000387382 68 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 HMGN2P39-201ENST00000398005 273 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 AL355796.1-201ENST00000406706 323 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 U3.40-201ENST00000408706 208 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 RNU6-1203P-201ENST00000410703 110 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 AL353689.1-201ENST00000438895 199 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 SNORD65B-201ENST00000459126 73 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 HMGB3P3-201ENST00000510526 400 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.99□□□□□ -2.09
ZIC3O60481 AC008749.1-201ENST00000597650 306 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 AC006380.1-201ENST00000603598 186 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 7SK.10-201ENST00000621414 298 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.99□□□□□ -2.09
ZIC3O60481 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZIC3O60481 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZIC3O60481 AL159152.1-201ENST00000635019 2587 ntBASIC1.99□□□□□ -2.09
ZIC3O60481 RNU1-58P-201ENST00000362413 163 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 RNU4-90P-201ENST00000362773 141 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 Y_RNA.396-201ENST00000383949 103 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 RNU6-574P-201ENST00000384265 107 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 Y_RNA.518-201ENST00000384552 113 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 MIR518A2-201ENST00000384966 87 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 MIR1283-2-201ENST00000408621 87 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.98□□□□□ -2.09
ZIC3O60481 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.98□□□□□ -2.09
ZIC3O60481 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.98□□□□□ -2.09
ZIC3O60481 BX510359.4-201ENST00000423750 193 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.98□□□□□ -2.09
ZIC3O60481 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.98□□□□□ -2.09
ZIC3O60481 AC010598.1-201ENST00000510378 103 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 AC107222.1-201ENST00000510899 637 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 AC011406.1-201ENST00000512440 370 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 RNU6-436P-201ENST00000516171 114 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 RNU6-570P-201ENST00000517051 105 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 SUMO2P18-201ENST00000518873 252 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.98□□□□□ -2.09
ZIC3O60481 SDR42E1P4-201ENST00000620894 481 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 MIR6873-201ENST00000622788 63 ntBASIC1.98□□□□□ -2.09
ZIC3O60481 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.98□□□□□ -2.09
ZIC3O60481 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ZIC3O60481 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ZIC3O60481 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
ZIC3O60481 U8.2-201ENST00000363156 134 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 RNU6-290P-201ENST00000365212 101 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 SNORA20B-201ENST00000384220 132 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 Y_RNA.461-201ENST00000384263 103 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 Y_RNA.483-201ENST00000384380 101 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 Y_RNA.556-201ENST00000384677 113 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 SNORA40.19-201ENST00000390846 128 ntBASIC1.97□□□□□ -2.09
ZIC3O60481 AL031003.1-201ENST00000404229 172 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms