Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MIR5188-201ENST00000583467 113 ntBASIC1.79□□□□□ -2.12
SSX4O60224 AC069114.2-201ENST00000604699 304 ntBASIC1.79□□□□□ -2.12
SSX4O60224 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.79□□□□□ -2.12
SSX4O60224 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.79□□□□□ -2.12
SSX4O60224 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX4O60224 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSX4O60224 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SSX4O60224 MIR410-201ENST00000362222 80 ntBASIC1.78□□□□□ -2.12
SSX4O60224 Y_RNA.31-201ENST00000362574 102 ntBASIC1.78□□□□□ -2.12
SSX4O60224 RNU6-961P-201ENST00000363893 105 ntBASIC1.78□□□□□ -2.12
SSX4O60224 Y_RNA.445-201ENST00000384168 102 ntBASIC1.78□□□□□ -2.12
SSX4O60224 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.78□□□□□ -2.12
SSX4O60224 RNA5SP475-201ENST00000410568 110 ntBASIC1.78□□□□□ -2.12
SSX4O60224 RPS20P15-201ENST00000412792 311 ntBASIC1.78□□□□□ -2.12
SSX4O60224 AC009310.1-201ENST00000414414 451 ntBASIC1.78□□□□□ -2.12
SSX4O60224 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.78□□□□□ -2.12
SSX4O60224 AC245047.4-201ENST00000433189 144 ntBASIC1.78□□□□□ -2.12
SSX4O60224 SNORD65B-201ENST00000459126 73 ntBASIC1.78□□□□□ -2.12
SSX4O60224 AC010409.1-201ENST00000487382 476 ntBASIC1.78□□□□□ -2.12
SSX4O60224 AC010469.2-201ENST00000496412 480 ntBASIC1.78□□□□□ -2.12
SSX4O60224 RNU6-295P-201ENST00000516901 104 ntBASIC1.78□□□□□ -2.12
SSX4O60224 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.78□□□□□ -2.12
SSX4O60224 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.78□□□□□ -2.12
SSX4O60224 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.78□□□□□ -2.12
SSX4O60224 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
SSX4O60224 AC011476.5-201ENST00000615594 130 ntBASIC1.78□□□□□ -2.12
SSX4O60224 AC007485.1-201ENST00000616755 206 ntBASIC1.78□□□□□ -2.12
SSX4O60224 U6.92-201ENST00000636464 89 ntBASIC1.78□□□□□ -2.12
SSX4O60224 MIR3674-201ENST00000636576 68 ntBASIC1.78□□□□□ -2.12
SSX4O60224 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSX4O60224 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
SSX4O60224 RNU6-112P-201ENST00000363599 104 ntBASIC1.77□□□□□ -2.13
SSX4O60224 RNU6-1019P-201ENST00000364424 107 ntBASIC1.77□□□□□ -2.13
SSX4O60224 RNA5SP467-201ENST00000391274 118 ntBASIC1.77□□□□□ -2.13
SSX4O60224 AL160004.2-201ENST00000432935 350 ntBASIC1.77□□□□□ -2.13
SSX4O60224 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.77□□□□□ -2.13
SSX4O60224 RPL26P26-201ENST00000480251 434 ntBASIC1.77□□□□□ -2.13
SSX4O60224 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.77□□□□□ -2.13
SSX4O60224 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.77□□□□□ -2.13
SSX4O60224 AC084364.2-201ENST00000546924 395 ntBASIC1.77□□□□□ -2.13
SSX4O60224 MIR4659A-201ENST00000580269 81 ntBASIC1.77□□□□□ -2.13
SSX4O60224 AL138825.1-201ENST00000618587 192 ntBASIC1.77□□□□□ -2.13
SSX4O60224 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SSX4O60224 RNU6-454P-201ENST00000364292 107 ntBASIC1.76□□□□□ -2.13
SSX4O60224 RNU6-474P-201ENST00000384243 107 ntBASIC1.76□□□□□ -2.13
SSX4O60224 AC019129.1-201ENST00000403786 261 ntBASIC1.76□□□□□ -2.13
SSX4O60224 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
SSX4O60224 AL445646.1-201ENST00000431784 216 ntBASIC1.76□□□□□ -2.13
SSX4O60224 HMGN2P23-201ENST00000456759 269 ntBASIC1.76□□□□□ -2.13
SSX4O60224 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.76□□□□□ -2.13
SSX4O60224 SNORA40.14-201ENST00000516543 86 ntBASIC1.76□□□□□ -2.13
SSX4O60224 SNORA31.17-201ENST00000516953 127 ntBASIC1.76□□□□□ -2.13
SSX4O60224 RN7SKP295-201ENST00000517264 153 ntBASIC1.76□□□□□ -2.13
SSX4O60224 AC027419.1-201ENST00000522976 328 ntBASIC1.76□□□□□ -2.13
SSX4O60224 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.76□□□□□ -2.13
SSX4O60224 HSBP1P1-201ENST00000555205 166 ntBASIC1.76□□□□□ -2.13
SSX4O60224 AC022254.1-201ENST00000567857 235 ntBASIC1.76□□□□□ -2.13
SSX4O60224 AC022432.1-201ENST00000595739 310 ntBASIC1.76□□□□□ -2.13
SSX4O60224 AC010900.2-201ENST00000604508 210 ntBASIC1.76□□□□□ -2.13
SSX4O60224 Y_RNA.783-201ENST00000613546 102 ntBASIC1.76□□□□□ -2.13
SSX4O60224 AC010615.1-201ENST00000594254 1764 ntBASIC1.75□□□□□ -2.13
SSX4O60224 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SSX4O60224 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
SSX4O60224 Y_RNA.138-201ENST00000363462 102 ntBASIC1.75□□□□□ -2.13
SSX4O60224 RNU6-1310P-201ENST00000384153 107 ntBASIC1.75□□□□□ -2.13
SSX4O60224 RNU6-296P-201ENST00000384608 107 ntBASIC1.75□□□□□ -2.13
SSX4O60224 MIR583-201ENST00000384846 75 ntBASIC1.75□□□□□ -2.13
SSX4O60224 MCFD2P1-201ENST00000417812 300 ntBASIC1.75□□□□□ -2.13
SSX4O60224 PMCHL1-202ENST00000423102 261 ntBASIC1.75□□□□□ -2.13
SSX4O60224 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.75□□□□□ -2.13
SSX4O60224 MTND4P19-201ENST00000446659 478 ntBASIC1.75□□□□□ -2.13
SSX4O60224 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SSX4O60224 RNA5SP458-201ENST00000516188 119 ntBASIC1.75□□□□□ -2.13
SSX4O60224 AC055872.1-201ENST00000570978 278 ntBASIC1.75□□□□□ -2.13
SSX4O60224 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.75□□□□□ -2.13
SSX4O60224 MIR4713-201ENST00000582691 75 ntBASIC1.75□□□□□ -2.13
SSX4O60224 AC240442.1-201ENST00000616055 283 ntBASIC1.75□□□□□ -2.13
SSX4O60224 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SSX4O60224 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SSX4O60224 Y_RNA.140-201ENST00000363474 103 ntBASIC1.74□□□□□ -2.13
SSX4O60224 SNORA20B-201ENST00000384220 132 ntBASIC1.74□□□□□ -2.13
SSX4O60224 MIR515-2-201ENST00000384883 83 ntBASIC1.74□□□□□ -2.13
SSX4O60224 MIR515-1-201ENST00000384884 83 ntBASIC1.74□□□□□ -2.13
SSX4O60224 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SSX4O60224 MRPL35P1-201ENST00000404272 572 ntBASIC1.74□□□□□ -2.13
SSX4O60224 AL355796.1-201ENST00000406706 323 ntBASIC1.74□□□□□ -2.13
SSX4O60224 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.74□□□□□ -2.13
SSX4O60224 AL139156.1-201ENST00000412785 841 ntBASIC1.74□□□□□ -2.13
SSX4O60224 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
SSX4O60224 SDAD1P3-201ENST00000427380 333 ntBASIC1.74□□□□□ -2.13
SSX4O60224 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.74□□□□□ -2.13
SSX4O60224 Y_RNA.631-201ENST00000459607 101 ntBASIC1.74□□□□□ -2.13
SSX4O60224 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.74□□□□□ -2.13
SSX4O60224 RPL23AP63-201ENST00000498752 471 ntBASIC1.74□□□□□ -2.13
SSX4O60224 AC010598.1-201ENST00000510378 103 ntBASIC1.74□□□□□ -2.13
SSX4O60224 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SSX4O60224 AC023442.1-201ENST00000531247 422 ntBASIC1.74□□□□□ -2.13
SSX4O60224 AL137100.2-201ENST00000555786 315 ntBASIC1.74□□□□□ -2.13
SSX4O60224 SNRPGP19-201ENST00000603826 189 ntBASIC1.74□□□□□ -2.13
SSX4O60224 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms