Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 SNORA28-201ENST00000606769 126 ntBASIC1.85□□□□□ -2.11
CREB3O43889 AC122108.2-201ENST00000611946 526 ntBASIC1.85□□□□□ -2.11
CREB3O43889 AC018630.2-201ENST00000534866 2403 ntBASIC1.85□□□□□ -2.11
CREB3O43889 RNU6-440P-201ENST00000390882 105 ntBASIC1.84□□□□□ -2.11
CREB3O43889 FGF7P8-201ENST00000402994 292 ntBASIC1.84□□□□□ -2.11
CREB3O43889 SUMO1P2-201ENST00000452524 304 ntBASIC1.84□□□□□ -2.11
CREB3O43889 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.84□□□□□ -2.11
CREB3O43889 AC099513.1-201ENST00000490423 301 ntBASIC1.84□□□□□ -2.11
CREB3O43889 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.84□□□□□ -2.11
CREB3O43889 AC027419.1-201ENST00000522976 328 ntBASIC1.84□□□□□ -2.11
CREB3O43889 AC023157.2-201ENST00000540596 141 ntBASIC1.84□□□□□ -2.11
CREB3O43889 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.84□□□□□ -2.11
CREB3O43889 AL078604.3-201ENST00000615580 211 ntBASIC1.84□□□□□ -2.11
CREB3O43889 Y_RNA.358-201ENST00000365491 99 ntBASIC1.83□□□□□ -2.12
CREB3O43889 Y_RNA.404-201ENST00000383978 102 ntBASIC1.83□□□□□ -2.12
CREB3O43889 Y_RNA.498-201ENST00000384460 102 ntBASIC1.83□□□□□ -2.12
CREB3O43889 AL135790.2-201ENST00000437701 267 ntBASIC1.83□□□□□ -2.12
CREB3O43889 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.83□□□□□ -2.12
CREB3O43889 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.83□□□□□ -2.12
CREB3O43889 RNU6-264P-201ENST00000517134 104 ntBASIC1.83□□□□□ -2.12
CREB3O43889 RAB11AP2-201ENST00000545905 639 ntBASIC1.83□□□□□ -2.12
CREB3O43889 AL669831.3-213ENST00000636676 183 ntBASIC1.83□□□□□ -2.12
CREB3O43889 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CREB3O43889 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CREB3O43889 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
CREB3O43889 MIR410-201ENST00000362222 80 ntBASIC1.82□□□□□ -2.12
CREB3O43889 Y_RNA.338-201ENST00000365320 114 ntBASIC1.82□□□□□ -2.12
CREB3O43889 MT-TL1-201ENST00000386347 75 ntBASIC1.82□□□□□ -2.12
CREB3O43889 AC097462.1-201ENST00000514125 324 ntBASIC1.82□□□□□ -2.12
CREB3O43889 SNORA31.10-201ENST00000516482 106 ntBASIC1.82□□□□□ -2.12
CREB3O43889 RNU7-172P-201ENST00000517125 64 ntBASIC1.82□□□□□ -2.12
CREB3O43889 AC018448.1-201ENST00000552843 316 ntBASIC1.82□□□□□ -2.12
CREB3O43889 AL161670.1-201ENST00000554348 137 ntBASIC1.82□□□□□ -2.12
CREB3O43889 AC073413.2-201ENST00000604332 360 ntBASIC1.82□□□□□ -2.12
CREB3O43889 PRR13P7-201ENST00000605538 430 ntBASIC1.82□□□□□ -2.12
CREB3O43889 AL513423.1-201ENST00000621695 132 ntBASIC1.82□□□□□ -2.12
CREB3O43889 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
CREB3O43889 TPTEP1-208ENST00000636884 213 ntBASIC1.82□□□□□ -2.12
CREB3O43889 RNU6-874P-201ENST00000362390 105 ntBASIC1.81□□□□□ -2.12
CREB3O43889 RNA5SP361-201ENST00000362686 118 ntBASIC1.81□□□□□ -2.12
CREB3O43889 RNU1-17P-201ENST00000363022 152 ntBASIC1.81□□□□□ -2.12
CREB3O43889 MIR625-201ENST00000385047 85 ntBASIC1.81□□□□□ -2.12
CREB3O43889 ELOCP21-201ENST00000412558 336 ntBASIC1.81□□□□□ -2.12
CREB3O43889 AC114482.1-201ENST00000418010 247 ntBASIC1.81□□□□□ -2.12
CREB3O43889 CYCSP49-201ENST00000420810 319 ntBASIC1.81□□□□□ -2.12
CREB3O43889 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.81□□□□□ -2.12
CREB3O43889 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.81□□□□□ -2.12
CREB3O43889 MIR2053-201ENST00000459295 91 ntBASIC1.81□□□□□ -2.12
CREB3O43889 RNU6-625P-201ENST00000459412 107 ntBASIC1.81□□□□□ -2.12
CREB3O43889 RPL30P7-201ENST00000479312 323 ntBASIC1.81□□□□□ -2.12
CREB3O43889 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.81□□□□□ -2.12
CREB3O43889 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.81□□□□□ -2.12
CREB3O43889 AP000942.3-201ENST00000603702 160 ntBASIC1.81□□□□□ -2.12
CREB3O43889 AC016727.1-205ENST00000605437 569 ntBASIC1.81□□□□□ -2.12
CREB3O43889 AL365434.2-201ENST00000607979 234 ntBASIC1.81□□□□□ -2.12
CREB3O43889 MIR8081-201ENST00000611533 95 ntBASIC1.81□□□□□ -2.12
CREB3O43889 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CREB3O43889 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CREB3O43889 MTND5P10-201ENST00000603719 1809 ntBASIC1.8□□□□□ -2.12
CREB3O43889 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.8□□□□□ -2.12
CREB3O43889 SNORA20B-201ENST00000384220 132 ntBASIC1.8□□□□□ -2.12
CREB3O43889 RNA5SP475-201ENST00000410568 110 ntBASIC1.8□□□□□ -2.12
CREB3O43889 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.8□□□□□ -2.12
CREB3O43889 AC082651.2-201ENST00000496833 166 ntBASIC1.8□□□□□ -2.12
CREB3O43889 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
CREB3O43889 MIR3618-201ENST00000580330 88 ntBASIC1.8□□□□□ -2.12
CREB3O43889 MIR5690-201ENST00000583739 73 ntBASIC1.8□□□□□ -2.12
CREB3O43889 AL390123.1-201ENST00000603216 237 ntBASIC1.8□□□□□ -2.12
CREB3O43889 AC080078.3-201ENST00000605407 463 ntBASIC1.8□□□□□ -2.12
CREB3O43889 AC073349.3-201ENST00000617616 186 ntBASIC1.8□□□□□ -2.12
CREB3O43889 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CREB3O43889 RNU1-22P-201ENST00000363334 158 ntBASIC1.79□□□□□ -2.12
CREB3O43889 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
CREB3O43889 SNORD26-201ENST00000384147 75 ntBASIC1.79□□□□□ -2.12
CREB3O43889 RNU6-1310P-201ENST00000384153 107 ntBASIC1.79□□□□□ -2.12
CREB3O43889 Y_RNA.599-201ENST00000410489 109 ntBASIC1.79□□□□□ -2.12
CREB3O43889 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.79□□□□□ -2.12
CREB3O43889 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.79□□□□□ -2.12
CREB3O43889 RNU6-1278P-201ENST00000516130 107 ntBASIC1.79□□□□□ -2.12
CREB3O43889 AC022306.2-201ENST00000617563 647 ntBASIC1.79□□□□□ -2.12
CREB3O43889 MIR6079-201ENST00000635807 62 ntBASIC1.79□□□□□ -2.12
CREB3O43889 MIR3674-201ENST00000636576 68 ntBASIC1.79□□□□□ -2.12
CREB3O43889 RNU6-407P-201ENST00000365280 104 ntBASIC1.78□□□□□ -2.12
CREB3O43889 Y_RNA.577-201ENST00000384794 101 ntBASIC1.78□□□□□ -2.12
CREB3O43889 RNU6-370P-201ENST00000411008 104 ntBASIC1.78□□□□□ -2.12
CREB3O43889 SNORA40.9-201ENST00000515895 93 ntBASIC1.78□□□□□ -2.12
CREB3O43889 SUB1P3-201ENST00000564581 315 ntBASIC1.78□□□□□ -2.12
CREB3O43889 AL021879.1-201ENST00000611756 288 ntBASIC1.78□□□□□ -2.12
CREB3O43889 MIR1244-1-201ENST00000612829 85 ntBASIC1.78□□□□□ -2.12
CREB3O43889 AL357075.2-201ENST00000614906 189 ntBASIC1.78□□□□□ -2.12
CREB3O43889 AC133104.2-201ENST00000615272 193 ntBASIC1.78□□□□□ -2.12
CREB3O43889 MIR1244-3-201ENST00000635744 85 ntBASIC1.78□□□□□ -2.12
CREB3O43889 MIR1244-2-201ENST00000636449 85 ntBASIC1.78□□□□□ -2.12
CREB3O43889 MIR1244-4-202ENST00000636813 85 ntBASIC1.78□□□□□ -2.12
CREB3O43889 SNORA27.1-201ENST00000362604 124 ntBASIC1.77□□□□□ -2.13
CREB3O43889 AL355796.1-201ENST00000406706 323 ntBASIC1.77□□□□□ -2.13
CREB3O43889 RPL30P13-201ENST00000418873 348 ntBASIC1.77□□□□□ -2.13
CREB3O43889 AC018865.2-201ENST00000423631 129 ntBASIC1.77□□□□□ -2.13
CREB3O43889 RNA5SP20-201ENST00000515976 84 ntBASIC1.77□□□□□ -2.13
CREB3O43889 RNU2-56P-201ENST00000516826 190 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms