Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MIR548B-201ENST00000385247 97 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 RNU6-257P-201ENST00000410238 98 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 AC245047.8-201ENST00000456455 284 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 MIR548X2-201ENST00000579776 100 ntBASIC3.18□□□□□ -1.9
SRGAP3O43295 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRGAP3O43295 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
SRGAP3O43295 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SRGAP3O43295 AC002546.1-201ENST00000588041 2504 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 RNU6-1205P-201ENST00000363625 106 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 Y_RNA.368-201ENST00000365547 113 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 RNU6-969P-201ENST00000383900 105 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 RNU6-1027P-201ENST00000383998 107 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 SNORA67.2-201ENST00000384300 149 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 MIR767-201ENST00000390228 109 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 AL355497.1-201ENST00000406262 551 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 AL031183.1-201ENST00000457667 207 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 RNU7-141P-201ENST00000459304 62 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.17□□□□□ -1.9
SRGAP3O43295 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.17□□□□□ -1.9
SRGAP3O43295 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 RNA5SP148-201ENST00000516527 94 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 AC090517.3-201ENST00000625170 141 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 MIR3658-201ENST00000636291 56 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SRGAP3O43295 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.17□□□□□ -1.9
SRGAP3O43295 AC010680.1-201ENST00000590024 3590 ntBASIC3.17□□□□□ -1.9
SRGAP3O43295 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SRGAP3O43295 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRGAP3O43295 SNORD21-201ENST00000383953 95 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 Y_RNA.456-201ENST00000384232 111 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 MIR513C-201ENST00000401352 84 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SRGAP3O43295 Z98742.2-201ENST00000431564 187 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.16□□□□□ -1.9
SRGAP3O43295 AC006483.1-201ENST00000487308 313 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 SNORA70.12-201ENST00000516084 153 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 RNA5SP320-201ENST00000516263 124 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 RNU6-453P-201ENST00000516819 85 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 AC022616.8-201ENST00000533569 253 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 AC109810.1-201ENST00000534066 224 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 AC079598.5-201ENST00000547460 117 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.16□□□□□ -1.9
SRGAP3O43295 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SRGAP3O43295 AC010332.2-201ENST00000613083 1904 ntBASIC3.16□□□□□ -1.9
SRGAP3O43295 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.16□□□□□ -1.9
SRGAP3O43295 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRGAP3O43295 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRGAP3O43295 RNU6-199P-201ENST00000362954 107 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 SNORA20-201ENST00000384662 132 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 MIR27B-201ENST00000385129 97 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 RNU6-1168P-201ENST00000390831 104 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 AC006461.1-201ENST00000412637 326 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 RPL30P13-201ENST00000418873 348 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 HSPE1P21-201ENST00000438283 308 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 UBE2DNL-203ENST00000474922 222 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 AC010409.1-201ENST00000487382 476 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
SRGAP3O43295 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.15□□□□□ -1.91
SRGAP3O43295 SCARNA8-201ENST00000515924 131 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 RNU5F-4P-201ENST00000516581 114 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 RNU6-826P-201ENST00000516827 104 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 DNAJC19P2-201ENST00000593340 302 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 AC025754.2-201ENST00000606491 432 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
SRGAP3O43295 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SRGAP3O43295 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.14□□□□□ -1.91
SRGAP3O43295 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.14□□□□□ -1.91
SRGAP3O43295 MIR367-201ENST00000362299 68 ntBASIC3.14□□□□□ -1.91
SRGAP3O43295 Y_RNA.310-201ENST00000365063 113 ntBASIC3.14□□□□□ -1.91
SRGAP3O43295 SNORA40-201ENST00000388090 126 ntBASIC3.14□□□□□ -1.91
SRGAP3O43295 AP000567.1-201ENST00000406413 156 ntBASIC3.14□□□□□ -1.91
SRGAP3O43295 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.14□□□□□ -1.91
SRGAP3O43295 AL121914.1-201ENST00000450188 156 ntBASIC3.14□□□□□ -1.91
SRGAP3O43295 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.14□□□□□ -1.91
SRGAP3O43295 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.14□□□□□ -1.91
SRGAP3O43295 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SRGAP3O43295 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.14□□□□□ -1.91
SRGAP3O43295 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SRGAP3O43295 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.13□□□□□ -1.91
SRGAP3O43295 MIR518C-201ENST00000384822 101 ntBASIC3.13□□□□□ -1.91
SRGAP3O43295 MIR616-201ENST00000385293 97 ntBASIC3.13□□□□□ -1.91
SRGAP3O43295 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.13□□□□□ -1.91
SRGAP3O43295 AC008267.6-201ENST00000441664 139 ntBASIC3.13□□□□□ -1.91
SRGAP3O43295 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.13□□□□□ -1.91
SRGAP3O43295 RNU7-121P-201ENST00000516604 62 ntBASIC3.13□□□□□ -1.91
SRGAP3O43295 AC008739.2-201ENST00000597006 317 ntBASIC3.13□□□□□ -1.91
SRGAP3O43295 RPL30P11-203ENST00000598995 310 ntBASIC3.13□□□□□ -1.91
SRGAP3O43295 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRGAP3O43295 Y_RNA.81-201ENST00000362997 102 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 Y_RNA.124-201ENST00000363339 93 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 Y_RNA.337-201ENST00000365312 102 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 Y_RNA.361-201ENST00000365515 120 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 MIR592-201ENST00000384959 97 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 MIR586-201ENST00000385035 97 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 MT-TT-201ENST00000387460 66 ntBASIC3.12□□□□□ -1.91
SRGAP3O43295 MIR526A2-201ENST00000390198 65 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms