Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.61□□□□□ -2.15
CDX4O14627 USP9YP16-201ENST00000430287 407 ntBASIC1.61□□□□□ -2.15
CDX4O14627 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.61□□□□□ -2.15
CDX4O14627 HMGN2P18-201ENST00000450680 270 ntBASIC1.61□□□□□ -2.15
CDX4O14627 USP9YP23-201ENST00000455085 407 ntBASIC1.61□□□□□ -2.15
CDX4O14627 RNA5SP233-201ENST00000459153 113 ntBASIC1.61□□□□□ -2.15
CDX4O14627 MTATP8P1-201ENST00000467115 207 ntBASIC1.61□□□□□ -2.15
CDX4O14627 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.61□□□□□ -2.15
CDX4O14627 MIR449C-201ENST00000516047 92 ntBASIC1.61□□□□□ -2.15
CDX4O14627 SNORA40.14-201ENST00000516543 86 ntBASIC1.61□□□□□ -2.15
CDX4O14627 Y_RNA.720-201ENST00000517166 92 ntBASIC1.61□□□□□ -2.15
CDX4O14627 AC040926.1-201ENST00000530195 238 ntBASIC1.61□□□□□ -2.15
CDX4O14627 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
CDX4O14627 MIR5695-201ENST00000579717 85 ntBASIC1.61□□□□□ -2.15
CDX4O14627 AC113195.1-201ENST00000579952 141 ntBASIC1.61□□□□□ -2.15
CDX4O14627 AC136443.5-201ENST00000603741 370 ntBASIC1.61□□□□□ -2.15
CDX4O14627 AC124312.5-201ENST00000604451 268 ntBASIC1.61□□□□□ -2.15
CDX4O14627 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.61□□□□□ -2.15
CDX4O14627 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
CDX4O14627 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.61□□□□□ -2.15
CDX4O14627 AC130454.1-201ENST00000622948 401 ntBASIC1.61□□□□□ -2.15
CDX4O14627 AL078596.1-201ENST00000624856 447 ntBASIC1.61□□□□□ -2.15
CDX4O14627 AC008555.8-201ENST00000623602 2168 ntBASIC1.61□□□□□ -2.15
CDX4O14627 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDX4O14627 ZNF204P-201ENST00000416749 2397 ntBASIC1.61□□□□□ -2.15
CDX4O14627 MTND5P35-201ENST00000557537 1720 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNA5SP361-201ENST00000362686 118 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNU1-76P-201ENST00000362903 159 ntBASIC1.6□□□□□ -2.15
CDX4O14627 SNORD115-3-201ENST00000363100 82 ntBASIC1.6□□□□□ -2.15
CDX4O14627 Y_RNA.153-201ENST00000363615 91 ntBASIC1.6□□□□□ -2.15
CDX4O14627 SNORA7.1-201ENST00000363750 139 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNU6-879P-201ENST00000364328 108 ntBASIC1.6□□□□□ -2.15
CDX4O14627 Y_RNA.455-201ENST00000384230 98 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNU6-159P-201ENST00000391080 106 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNU6-101P-201ENST00000410323 104 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNA5SP450-201ENST00000411206 102 ntBASIC1.6□□□□□ -2.15
CDX4O14627 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.6□□□□□ -2.15
CDX4O14627 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.6□□□□□ -2.15
CDX4O14627 HMGN2P19-201ENST00000425149 265 ntBASIC1.6□□□□□ -2.15
CDX4O14627 EIF1P2-201ENST00000428233 350 ntBASIC1.6□□□□□ -2.15
CDX4O14627 AL353689.1-201ENST00000438895 199 ntBASIC1.6□□□□□ -2.15
CDX4O14627 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.6□□□□□ -2.15
CDX4O14627 MTCO3P8-201ENST00000453691 755 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNU1-123P-201ENST00000458950 160 ntBASIC1.6□□□□□ -2.15
CDX4O14627 U8.20-201ENST00000459445 131 ntBASIC1.6□□□□□ -2.15
CDX4O14627 AC010469.2-201ENST00000496412 480 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNU6-1114P-201ENST00000516022 107 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNU6-475P-201ENST00000516073 104 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNA5SP364-201ENST00000516938 78 ntBASIC1.6□□□□□ -2.15
CDX4O14627 RNA5SP54-201ENST00000516951 92 ntBASIC1.6□□□□□ -2.15
CDX4O14627 AC125232.2-201ENST00000592457 143 ntBASIC1.6□□□□□ -2.15
CDX4O14627 SNRPGP20-201ENST00000604477 205 ntBASIC1.6□□□□□ -2.15
CDX4O14627 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.6□□□□□ -2.15
CDX4O14627 AL627230.6-201ENST00000611129 280 ntBASIC1.6□□□□□ -2.15
CDX4O14627 AC005296.1-201ENST00000616145 209 ntBASIC1.6□□□□□ -2.15
CDX4O14627 AC005562.2-201ENST00000618264 111 ntBASIC1.6□□□□□ -2.15
CDX4O14627 AP000553.5-201ENST00000641933 54 ntBASIC1.6□□□□□ -2.15
CDX4O14627 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CDX4O14627 RNU1-58P-201ENST00000362413 163 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNU6-1301P-201ENST00000362724 104 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNU6-873P-201ENST00000363833 107 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNU6-281P-201ENST00000384212 103 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNU6-318P-201ENST00000384283 103 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNU1-139P-201ENST00000391307 165 ntBASIC1.59□□□□□ -2.15
CDX4O14627 MIR1262-201ENST00000408276 93 ntBASIC1.59□□□□□ -2.15
CDX4O14627 AC123900.1-201ENST00000420390 96 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RPL23AP3-201ENST00000453844 468 ntBASIC1.59□□□□□ -2.15
CDX4O14627 MTND5P22-201ENST00000458380 195 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNU6-717P-201ENST00000459076 104 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNU7-14P-201ENST00000459331 62 ntBASIC1.59□□□□□ -2.15
CDX4O14627 AC007215.1-201ENST00000464893 276 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNU6-911P-201ENST00000516523 104 ntBASIC1.59□□□□□ -2.15
CDX4O14627 RNA5SP102-201ENST00000516865 106 ntBASIC1.59□□□□□ -2.15
CDX4O14627 AL442163.3-201ENST00000554110 156 ntBASIC1.59□□□□□ -2.15
CDX4O14627 MIR4299-201ENST00000577899 72 ntBASIC1.59□□□□□ -2.15
CDX4O14627 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.59□□□□□ -2.15
CDX4O14627 TCL6_2.1-201ENST00000615162 119 ntBASIC1.59□□□□□ -2.15
CDX4O14627 AL138825.1-201ENST00000618587 192 ntBASIC1.59□□□□□ -2.15
CDX4O14627 SNORD115-8-201ENST00000363856 82 ntBASIC1.58□□□□□ -2.16
CDX4O14627 SNORD31B-201ENST00000364977 69 ntBASIC1.58□□□□□ -2.16
CDX4O14627 SNORD115-38-201ENST00000365037 82 ntBASIC1.58□□□□□ -2.16
CDX4O14627 Y_RNA.332-201ENST00000365271 113 ntBASIC1.58□□□□□ -2.16
CDX4O14627 SNORA18.2-201ENST00000383865 132 ntBASIC1.58□□□□□ -2.16
CDX4O14627 RNU6-926P-201ENST00000384075 107 ntBASIC1.58□□□□□ -2.16
CDX4O14627 RPL21P1-201ENST00000399532 476 ntBASIC1.58□□□□□ -2.16
CDX4O14627 MIR300-201ENST00000401138 83 ntBASIC1.58□□□□□ -2.16
CDX4O14627 RNU6-1001P-201ENST00000411265 100 ntBASIC1.58□□□□□ -2.16
CDX4O14627 MTCO3P19-201ENST00000415864 321 ntBASIC1.58□□□□□ -2.16
CDX4O14627 MTND2P29-201ENST00000438595 412 ntBASIC1.58□□□□□ -2.16
CDX4O14627 AC093852.1-201ENST00000503587 266 ntBASIC1.58□□□□□ -2.16
CDX4O14627 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.58□□□□□ -2.16
CDX4O14627 ATP5EP1-201ENST00000510257 156 ntBASIC1.58□□□□□ -2.16
CDX4O14627 SNORA25.14-201ENST00000516481 132 ntBASIC1.58□□□□□ -2.16
CDX4O14627 RNU6-1098P-201ENST00000516772 96 ntBASIC1.58□□□□□ -2.16
CDX4O14627 Y_RNA.715-201ENST00000517082 110 ntBASIC1.58□□□□□ -2.16
CDX4O14627 Y_RNA.721-201ENST00000517207 102 ntBASIC1.58□□□□□ -2.16
CDX4O14627 AC022616.4-201ENST00000522985 181 ntBASIC1.58□□□□□ -2.16
CDX4O14627 DEFB131C-201ENST00000528817 165 ntBASIC1.58□□□□□ -2.16
CDX4O14627 AC093023.1-201ENST00000547375 507 ntBASIC1.58□□□□□ -2.16
CDX4O14627 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms