Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC008413.1-201ENST00000511864 177 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 RNU6-313P-201ENST00000516317 112 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 RNA5SP54-201ENST00000516951 92 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM38O00635 AC008749.1-201ENST00000597650 306 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.64□□□□□ -1.99
TRIM38O00635 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM38O00635 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
TRIM38O00635 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM38O00635 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
TRIM38O00635 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM38O00635 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TRIM38O00635 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TRIM38O00635 RNU6-626P-201ENST00000363354 107 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 Y_RNA.136-201ENST00000363444 102 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 RNU6-818P-201ENST00000364837 108 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 RNU6-20P-201ENST00000384106 107 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 Y_RNA.497-201ENST00000384447 98 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 SNORA67.4-201ENST00000384688 142 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 MIR487A-201ENST00000385009 80 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TRIM38O00635 AC096638.1-201ENST00000444678 216 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM38O00635 AC018868.1-201ENST00000491307 315 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM38O00635 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM38O00635 RNU6-1114P-201ENST00000516022 107 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 RNU6-62P-201ENST00000516526 102 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 NDUFA5P6-201ENST00000542110 379 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM38O00635 AC005828.6-201ENST00000606610 232 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 AC073349.3-201ENST00000617616 186 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 AC080100.1-201ENST00000624239 5356 ntBASIC2.63□□□□□ -1.99
TRIM38O00635 RNU6-653P-201ENST00000363074 106 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 Y_RNA.217-201ENST00000364214 105 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 RNU6-1175P-201ENST00000365200 107 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 RNU6-514P-201ENST00000384208 107 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 Y_RNA.586-201ENST00000391146 98 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 SNORA12-201ENST00000391162 147 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 MIR320B2-201ENST00000408479 138 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 RNU6-1001P-201ENST00000411265 100 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM38O00635 AL162725.1-201ENST00000435405 301 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM38O00635 Y_RNA.641-201ENST00000459414 105 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 RNA5SP272-201ENST00000516095 111 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 RNU6-966P-201ENST00000516479 104 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 RN7SKP49-201ENST00000516675 260 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 SNORA31.15-201ENST00000516771 132 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM38O00635 UBL5P4-201ENST00000562584 236 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 AL590808.1-201ENST00000618696 141 ntBASIC2.62□□□□□ -1.99
TRIM38O00635 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TRIM38O00635 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM38O00635 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
TRIM38O00635 AP006437.1-201ENST00000641440 3685 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 SNORD20-201ENST00000384550 80 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 RNU6-417P-201ENST00000384712 107 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 MIR10B-201ENST00000385011 110 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 RNU2-48P-201ENST00000410694 191 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM38O00635 AC007395.1-201ENST00000451333 677 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM38O00635 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM38O00635 HSPE1P18-201ENST00000517602 280 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM38O00635 AC055872.1-201ENST00000570978 278 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 AC091895.1-201ENST00000624494 256 ntBASIC2.61□□□□□ -1.99
TRIM38O00635 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM38O00635 AC100821.1-201ENST00000523153 2479 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM38O00635 MIR6073-201ENST00000352083 89 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 RNU5F-3P-201ENST00000363767 117 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 Y_RNA.319-201ENST00000365138 92 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 RNU6-234P-201ENST00000365229 104 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 Y_RNA.400-201ENST00000383963 111 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 RNU6-281P-201ENST00000384212 103 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 MIR329-1-201ENST00000385028 80 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 MIR549A-201ENST00000385268 96 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 AL357139.1-201ENST00000407792 426 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 AC009963.1-201ENST00000417265 157 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 AC024067.1-201ENST00000426199 223 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 WARS2P1-201ENST00000429678 537 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 POLR2KP2-201ENST00000438155 177 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 HMGB3P3-201ENST00000510526 400 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 SNORA40.9-201ENST00000515895 93 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 RNU1-41P-201ENST00000516161 162 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 RNU1-48P-201ENST00000516400 162 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 RNU6-426P-201ENST00000516464 97 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM38O00635 MIR5695-201ENST00000579717 85 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 SNRPGP20-201ENST00000604477 205 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 AL357075.2-201ENST00000614906 189 ntBASIC2.6□□□□□ -1.99
TRIM38O00635 MTND1P7-201ENST00000632801 297 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms