Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RNU6-980P-201ENST00000516925 103 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 RNU6-58P-201ENST00000517143 103 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC104383.1-201ENST00000530297 370 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC008752.3-201ENST00000588113 712 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 U6.90-201ENST00000614007 104 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC104260.1-201ENST00000616660 539 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC253576.2-201ENST00000618815 580 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 U6.70-201ENST00000620287 104 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 RNY1P7-201ENST00000384743 110 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 MIR1298-201ENST00000408783 112 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 RPS3AP3-201ENST00000411933 242 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AL031779.1-201ENST00000415663 330 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC090960.1-201ENST00000421072 306 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 RNU7-140P-201ENST00000459546 60 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC026782.1-201ENST00000512952 449 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 MTCO3P27-201ENST00000514397 196 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 RNU7-99P-201ENST00000516271 62 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC026616.1-201ENST00000523157 525 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AL512347.1-201ENST00000566420 503 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC068790.2-201ENST00000602601 557 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC011921.3-201ENST00000605540 361 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC122133.1-201ENST00000613964 233 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 MIR499B-201ENST00000636498 73 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 AC103706.2-201ENST00000638080 240 ntBASIC-0.23□□□□□ -2.45
CACNA1AO00555 SNORA1B-201ENST00000362535 133 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 RNU6-137P-201ENST00000363680 108 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 RNU6-226P-201ENST00000363778 107 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 RNY3P13-201ENST00000365542 102 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 RNU6-417P-201ENST00000384712 107 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 MIR454-201ENST00000390180 115 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 PCNPP3-201ENST00000393579 471 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 RNA5SP95-201ENST00000410319 137 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC008134.1-201ENST00000420943 193 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AL953862.1-201ENST00000423016 168 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 SNORA74.3-201ENST00000517108 154 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 RNU7-156P-201ENST00000517214 74 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 AP002004.2-201ENST00000531656 154 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC023157.2-201ENST00000540596 141 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC131159.1-201ENST00000621854 213 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC024940.5-201ENST00000622889 474 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 MIR1322-201ENST00000638013 71 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
CACNA1AO00555 MIR196A1-201ENST00000388006 70 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 MTND4LP14-201ENST00000429447 288 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 CALM2P4-201ENST00000430810 426 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC005042.3-201ENST00000453230 174 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC016632.1-201ENST00000503994 196 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC079395.1-201ENST00000510981 262 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 RNU6-551P-201ENST00000516661 103 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 MIR4436A-201ENST00000585278 85 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AL670379.3-201ENST00000605040 251 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.24□□□□□ -2.45
CACNA1AO00555 MIR8084-201ENST00000614105 89 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 AL162376.1-201ENST00000624117 175 ntBASIC-0.24□□□□□ -2.45
CACNA1AO00555 MIR16-2-201ENST00000362117 81 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 RNU5B-1-201ENST00000363286 116 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 SNORA33-201ENST00000363664 130 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 RNU6-726P-201ENST00000364680 107 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 RNU6-946P-201ENST00000383878 107 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 RNU6-205P-201ENST00000390858 107 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 SNORD83.1-201ENST00000411362 77 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AC007283.2-201ENST00000424739 197 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AC078809.1-201ENST00000427601 140 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AC107297.1-201ENST00000459991 176 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AC007215.1-201ENST00000464893 276 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AC114755.3-201ENST00000481111 251 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AC008628.2-201ENST00000502605 298 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AC107401.1-201ENST00000503426 685 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 MIR4771-2-201ENST00000577758 74 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 MIR5708-201ENST00000579723 85 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 MIR4771-1-201ENST00000582617 74 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.25□□□□□ -2.45
CACNA1AO00555 DEFB131E-202ENST00000602581 683 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 AL157770.1-201ENST00000623049 439 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 MTND4P4-201ENST00000439033 1366 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 SNORD68-201ENST00000363214 84 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 RNU6-353P-201ENST00000364266 108 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 SNORA2.2-201ENST00000365473 135 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 RNU6-364P-201ENST00000384387 107 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 MIR19A-201ENST00000384878 82 ntBASIC-0.25□□□□□ -2.45
CACNA1AO00555 MIR452-201ENST00000385020 85 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms