Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 USP9YP23-201ENST00000455085 407 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.23□□□□□ -2.21
DDX39AO00148 AC023157.2-201ENST00000540596 141 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 SNORA28-201ENST00000606769 126 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 AL050343.2-201ENST00000607338 280 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 AC100812.1-201ENST00000607622 580 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 AC100810.6-201ENST00000638068 285 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
DDX39AO00148 Y_RNA.157-201ENST00000363638 102 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 RNU4-76P-201ENST00000364509 141 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 Y_RNA.573-201ENST00000384763 105 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 MIR499A-201ENST00000384903 122 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 RNU1-139P-201ENST00000391307 165 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 MIR1287-201ENST00000408492 90 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 STAG3L5P-204ENST00000443759 179 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 AC010469.2-201ENST00000496412 480 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.22□□□□□ -2.21
DDX39AO00148 AC105313.1-201ENST00000509121 353 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 AC010598.1-201ENST00000510378 103 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 RNU6-165P-201ENST00000517170 99 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.22□□□□□ -2.21
DDX39AO00148 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
DDX39AO00148 AL022345.2-201ENST00000606307 135 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 BX284668.6-201ENST00000606899 438 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 AC106754.2-201ENST00000623006 233 ntBASIC1.22□□□□□ -2.21
DDX39AO00148 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
DDX39AO00148 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
DDX39AO00148 Y_RNA.89-201ENST00000363031 102 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
DDX39AO00148 SNORA12.1-201ENST00000390873 148 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 RNU6-922P-201ENST00000516753 99 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 AC093023.1-201ENST00000547375 507 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.21□□□□□ -2.22
DDX39AO00148 AL513534.2-201ENST00000603836 250 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 MIR3662-201ENST00000637030 95 ntBASIC1.21□□□□□ -2.22
DDX39AO00148 RNU6-222P-201ENST00000362438 107 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 RNU6-1059P-201ENST00000363752 98 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 Y_RNA.450-201ENST00000384198 113 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 AL139396.1-201ENST00000421137 167 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 USP9YP30-201ENST00000430729 455 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 RNU6-566P-201ENST00000516790 107 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 RNU6-1088P-201ENST00000516850 104 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 AC093913.1-201ENST00000614178 329 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 MIR6128-201ENST00000615528 109 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 MIR6079-201ENST00000635807 62 ntBASIC1.2□□□□□ -2.22
DDX39AO00148 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
DDX39AO00148 RNU4-12P-201ENST00000365233 139 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 RNU6-831P-201ENST00000384548 107 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 Y_RNA.554-201ENST00000384672 102 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 MTCO3P19-201ENST00000415864 321 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 RAB28P5-201ENST00000427490 651 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 MTND1P17-201ENST00000448961 204 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 HSPE1P13-201ENST00000451143 297 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 AC097462.1-201ENST00000514125 324 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.19□□□□□ -2.22
DDX39AO00148 MIR4778-201ENST00000577635 80 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 MIR6504-201ENST00000613520 61 ntBASIC1.19□□□□□ -2.22
DDX39AO00148 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.19□□□□□ -2.22
DDX39AO00148 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
DDX39AO00148 RNU6-623P-201ENST00000363143 105 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 RNU6-281P-201ENST00000384212 103 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
DDX39AO00148 DYNLT3P2-201ENST00000442517 295 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.18□□□□□ -2.22
DDX39AO00148 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.18□□□□□ -2.22
DDX39AO00148 AC046134.1-201ENST00000514454 666 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 RNU7-172P-201ENST00000517125 64 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 CYCSP23-201ENST00000519781 313 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 RPL21P9-201ENST00000556149 474 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 EIF1P4-201ENST00000572664 335 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 AC090617.3-201ENST00000573670 475 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 MIR3684-201ENST00000579779 74 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 GHRLOS.1-201ENST00000610995 70 ntBASIC1.18□□□□□ -2.22
DDX39AO00148 RNU6-199P-201ENST00000362954 107 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 Y_RNA.106-201ENST00000363189 100 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 Y_RNA.224-201ENST00000364308 111 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 Y_RNA.265-201ENST00000364677 108 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 Y_RNA.295-201ENST00000364918 102 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 SNORD114-22-201ENST00000365423 72 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 RNU6-1264P-201ENST00000383891 107 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 MIR562-201ENST00000384894 95 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 RNU6-1148P-201ENST00000410992 104 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 RNU6-1001P-201ENST00000411265 100 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.17□□□□□ -2.22
DDX39AO00148 UQCRBP2-201ENST00000447827 297 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.17□□□□□ -2.22
DDX39AO00148 SNORA31.4-201ENST00000516049 129 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 RNU6-720P-201ENST00000516363 108 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms