Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-1240P-201ENST00000365155 104 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 Y_RNA.364-201ENST00000365532 101 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 Y_RNA.474-201ENST00000384341 102 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 Y_RNA.557-201ENST00000384680 107 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 MIR329-1-201ENST00000385028 80 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 SNORA12.1-201ENST00000390873 148 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 MIR1253-201ENST00000408273 105 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 MIR1267-201ENST00000408723 78 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-370P-201ENST00000411008 104 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 JTBP1-201ENST00000441314 247 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 RNU1-98P-201ENST00000458992 160 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 snoU13.27-201ENST00000459278 104 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 RNU7-87P-201ENST00000459343 62 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 RPS26P45-201ENST00000471748 340 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AL163195.1-201ENST00000496941 348 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 HMGN1P12-201ENST00000499125 195 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 SNORA20.3-201ENST00000516880 132 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AP002001.1-203ENST00000534002 267 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AC004584.2-201ENST00000570407 410 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AC090617.3-201ENST00000573670 475 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 AC022217.4-201ENST00000604389 163 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 MIR1244-1-201ENST00000612829 85 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 MIR1244-3-201ENST00000635744 85 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 MIR1244-2-201ENST00000636449 85 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 MIR1244-4-202ENST00000636813 85 ntBASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
SMIM28A0A1B0GU29 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 Y_RNA.226-201ENST00000364337 114 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 SNORA72.2-201ENST00000365028 127 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-318P-201ENST00000384283 103 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 MIR1276-201ENST00000408707 83 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 Y_RNA.646-201ENST00000410980 101 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 RNA5SP247-201ENST00000411181 105 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 ELOCP21-201ENST00000412558 336 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 AC092423.1-201ENST00000430165 186 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 snoU13.9-201ENST00000458927 103 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 AC099513.1-201ENST00000490423 301 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-1146P-201ENST00000516282 102 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 AC099654.5-201ENST00000636479 350 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
SMIM28A0A1B0GU29 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 Y_RNA.358-201ENST00000365491 99 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 MIR515-2-201ENST00000384883 83 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 MIR515-1-201ENST00000384884 83 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 MIR194-1-201ENST00000384892 85 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-360P-201ENST00000390944 104 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-700P-201ENST00000391043 107 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 MTCYBP10-201ENST00000424905 650 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 AC069257.2-201ENST00000441819 155 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 Y_RNA.635-201ENST00000459041 101 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 HMGN1P13-201ENST00000505795 138 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 SNORA31.10-201ENST00000516482 106 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 RNA5SP481-201ENST00000516814 122 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 APOOP3-201ENST00000536787 586 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 AL121579.1-201ENST00000555129 305 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 AC022432.1-201ENST00000595739 310 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 PISRT1.1-201ENST00000616930 107 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 AC092794.2-201ENST00000620933 563 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 AC099654.14-201ENST00000638599 341 ntBASIC1.25□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-1188P-201ENST00000363795 107 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-271P-201ENST00000363858 105 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-99P-201ENST00000364721 107 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-310P-201ENST00000384655 107 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 RNA5SP323-201ENST00000391094 133 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 RPL21P1-201ENST00000399532 476 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC138393.2-201ENST00000414742 246 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 EBAG9P1-201ENST00000418955 543 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC010154.1-201ENST00000425857 269 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 TOMM22P2-201ENST00000430735 237 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 HSPE1P24-201ENST00000450782 238 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 RNU6-107P-201ENST00000516643 102 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC022868.1-201ENST00000517767 391 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC027419.1-201ENST00000522976 328 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC024995.1-201ENST00000523014 93 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AL929325.1-201ENST00000603096 117 ntBASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.24□□□□□ -2.21
SMIM28A0A1B0GU29 AL161722.3-201ENST00000605789 2983 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms