Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 Y_RNA.354-201ENST00000365448 111 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 SNORD37.1-201ENST00000390968 65 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 FABP5P4-201ENST00000437203 171 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 MTCO2P7-201ENST00000446518 666 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 AC107401.1-201ENST00000503426 685 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 AC113410.1-201ENST00000505029 247 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 AC097462.1-201ENST00000514125 324 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 RNU7-12P-201ENST00000516030 62 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 AC091144.1-201ENST00000519573 138 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 AC100830.2-201ENST00000581636 240 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 AC091178.2-201ENST00000584401 117 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 MIR6515-201ENST00000619843 57 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 Y_RNA.1-201ENST00000352915 104 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.169-201ENST00000363745 96 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.355-201ENST00000365462 98 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-945P-201ENST00000383947 107 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-214P-201ENST00000384130 107 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-933P-201ENST00000384424 107 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.508-201ENST00000384502 114 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 MIR10B-201ENST00000385011 110 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 SNORD99-201ENST00000408612 74 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 LINC01399-202ENST00000458450 244 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-1116P-201ENST00000517269 99 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 AC022868.1-201ENST00000517767 391 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 AC012557.2-201ENST00000605919 418 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 AC009248.2-201ENST00000619826 254 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 ELL2P3-201ENST00000457883 1602 ntBASIC0.34□□□□□ -2.36
TRAV41A0A0B4J266 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.151-201ENST00000363566 112 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-522P-201ENST00000364497 107 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 RNU4-9P-201ENST00000364951 139 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 SNORA75-201ENST00000384158 137 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-793P-201ENST00000384233 104 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 MIR514A2-201ENST00000385131 88 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 MIR514A3-201ENST00000385132 88 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 RNU1-139P-201ENST00000391307 165 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 RPL30P16-201ENST00000419341 429 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 RPL30P10-201ENST00000488148 337 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 RNU7-172P-201ENST00000517125 64 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 AP003716.2-201ENST00000528260 108 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 AC023827.1-201ENST00000569247 97 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 AC131055.1-201ENST00000584626 316 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 AC007684.1-201ENST00000609671 477 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 AL158063.1-201ENST00000615349 536 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 AC073534.2-201ENST00000620377 381 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 AC006504.8-201ENST00000621046 635 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 AL008636.1-201ENST00000625038 1018 ntBASIC0.33□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.796-201ENST00000364268 102 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.267-201ENST00000364679 109 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.799-201ENST00000364992 102 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.330-201ENST00000365230 109 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-159P-201ENST00000391080 106 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 EIF4E2P1-201ENST00000393781 255 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 MTCO3P19-201ENST00000415864 321 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 AL162725.1-201ENST00000435405 301 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-261P-201ENST00000459506 102 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 AP000870.1-201ENST00000472927 406 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-496P-201ENST00000516145 99 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-1291P-201ENST00000516591 104 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 RNU2-56P-201ENST00000516826 190 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 RNU6-341P-201ENST00000516973 96 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 AC109810.1-201ENST00000534066 224 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 7SK.7-201ENST00000603504 247 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 AC006435.5-201ENST00000624486 112 ntBASIC0.32□□□□□ -2.36
TRAV41A0A0B4J266 RNA5SP264-201ENST00000363115 107 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 MIR153-2-201ENST00000385225 87 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 SNORD89-201ENST00000390981 114 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 MIR1185-1-201ENST00000408598 86 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 Z98949.2-201ENST00000440996 144 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 MTND3P16-201ENST00000452205 344 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC083904.1-201ENST00000487828 231 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 MTCO2P30-201ENST00000503662 364 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC018710.1-201ENST00000506509 158 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC091885.1-201ENST00000506658 268 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC010598.1-201ENST00000510378 103 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC093303.1-201ENST00000514549 295 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 RNA5SP436-201ENST00000516020 115 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 Y_RNA.673-201ENST00000516306 88 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 MTND4LP26-201ENST00000518144 282 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC104383.1-201ENST00000530297 370 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC026371.1-201ENST00000551867 419 ntBASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV41A0A0B4J266 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms