Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 Z98949.2-201ENST00000440996 144 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AL033528.1-201ENST00000453780 140 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AC010598.1-201ENST00000510378 103 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AC097462.1-201ENST00000514125 324 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU11-2P-201ENST00000516898 142 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AP002963.1-201ENST00000530590 184 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AP002004.2-201ENST00000531656 154 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AC011458.1-201ENST00000604034 617 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR8076-201ENST00000611401 83 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 HULC.1-201ENST00000612720 240 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AL008636.1-201ENST00000625038 1018 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-181P-201ENST00000363225 107 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU4-28P-201ENST00000364739 141 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-517P-201ENST00000384362 110 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-456P-201ENST00000384493 107 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR891A-201ENST00000401237 79 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 AC133104.1-201ENST00000429100 218 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 AC067940.1-201ENST00000458411 300 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 AC010469.2-201ENST00000496412 480 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 CCDC34P1-201ENST00000507441 517 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU2-56P-201ENST00000516826 190 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-445P-201ENST00000516949 107 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 RNA5SP330-201ENST00000517096 96 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 AC023157.2-201ENST00000540596 141 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 AC027279.3-201ENST00000625055 122 ntBASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 FER-210ENST00000628534 558 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1214P-201ENST00000363650 109 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1297P-201ENST00000384415 104 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-297P-201ENST00000384636 107 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 RNA5SP219-201ENST00000390940 113 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 CALM2P3-201ENST00000400429 449 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR1197-201ENST00000408818 88 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 MTND4P18-201ENST00000447010 465 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORD42A-201ENST00000459584 64 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 AC091021.1-201ENST00000468051 388 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 AC092989.1-201ENST00000481235 277 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1198P-201ENST00000516904 67 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU7-172P-201ENST00000517125 64 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1116P-201ENST00000517269 99 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 AL358944.1-201ENST00000528537 144 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR4424-201ENST00000585257 86 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 AC104695.3-201ENST00000604052 296 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 AC007684.1-201ENST00000609671 477 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 AC068137.4-201ENST00000638485 296 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 AC073544.1-201ENST00000600110 1595 ntBASIC0.06□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORD113.3-201ENST00000364630 78 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU5A-5P-201ENST00000411054 116 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 MTND4P32-201ENST00000437189 1237 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 AL392103.1-201ENST00000447000 198 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 MTCO3P38-201ENST00000468910 766 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU7-41P-201ENST00000515917 61 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORA74.3-201ENST00000517108 154 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 AC104383.1-201ENST00000530297 370 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 AC087683.1-201ENST00000591187 441 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 MTND4P12-201ENST00000498999 1377 ntBASIC0.05□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORD115-32-201ENST00000364079 82 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 Y_RNA.415-201ENST00000384012 112 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORA40.3-201ENST00000390964 122 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-248P-201ENST00000410720 107 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 AC107401.1-201ENST00000503426 685 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 CYCTP-201ENST00000504253 315 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORA25.14-201ENST00000516481 132 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1096P-201ENST00000517089 102 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 AL157687.1-201ENST00000554853 619 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 RPL21P9-201ENST00000556149 474 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 RAC1P9-201ENST00000604990 392 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 AC103705.1-201ENST00000619013 241 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 AL109933.3-201ENST00000619095 188 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 AL158209.2-201ENST00000619266 216 ntBASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.04□□□□□ -2.4
TRAV1-1A0A0B4J248 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1120P-201ENST00000362988 108 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 Y_RNA.267-201ENST00000364679 109 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR573-201ENST00000384964 99 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR32-201ENST00000384965 70 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR625-201ENST00000385047 85 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR1302-7-201ENST00000408841 72 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-325P-201ENST00000411132 105 ntBASIC0.03□□□□□ -2.4
TRAV1-1A0A0B4J248 ZNF885P-201ENST00000420174 1098 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms