Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-969P-201ENST00000383900 105 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 SNORD14D-201ENST00000384390 87 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-1117P-201ENST00000384525 104 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-239P-201ENST00000390990 99 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 MTATP6P29-201ENST00000415057 132 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 AL162725.1-201ENST00000435405 301 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 RNU7-57P-201ENST00000459540 60 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-1007P-201ENST00000516586 107 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 SNORA64.4-201ENST00000516632 81 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 MIR3684-201ENST00000579779 74 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 MIR4753-201ENST00000585119 83 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 Y_RNA.778-201ENST00000620203 90 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-486P-201ENST00000363116 107 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 Y_RNA.361-201ENST00000365515 120 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 Y_RNA.568-201ENST00000384742 113 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 MIR300-201ENST00000401138 83 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 MIR1283-1-201ENST00000408494 87 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 AC245047.8-201ENST00000456455 284 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-453P-201ENST00000516819 85 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 MIR4431-201ENST00000579990 94 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 MIR6715A-201ENST00000615929 79 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 AC110079.1-202ENST00000635213 138 ntBASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.43□□□□□ -1.86
SNCAIPQ9Y6H5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 RNA5SP383-201ENST00000362934 120 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 Y_RNA.124-201ENST00000363339 93 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 SNORD56.3-201ENST00000363507 71 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 Y_RNA.172-201ENST00000363765 102 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-944P-201ENST00000364023 107 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 RNU2-52P-201ENST00000410680 190 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 AC074290.1-201ENST00000448883 135 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 RNU1-143P-201ENST00000516296 146 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 AC090616.3-201ENST00000582184 217 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 U1.23-201ENST00000610293 146 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 RNU1-68P-201ENST00000615382 146 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 U1.39-201ENST00000621562 146 ntBASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNCAIPQ9Y6H5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-1274P-201ENST00000384557 107 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 AL355796.1-201ENST00000406706 323 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 AL121890.1-201ENST00000435457 205 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 SNORD109B-201ENST00000458961 67 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 SNORD109A-201ENST00000459128 67 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 AC117454.1-201ENST00000491120 168 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 SCARNA8-201ENST00000515924 131 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 RNA5SP272-201ENST00000516095 111 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 RNU6-426P-201ENST00000516464 97 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 AC022616.8-201ENST00000533569 253 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 AC104984.5-201ENST00000586878 94 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 AC002064.3-201ENST00000623448 346 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 AC068647.2-201ENST00000637380 353 ntBASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNCAIPQ9Y6H5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SNCAIPQ9Y6H5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SNCAIPQ9Y6H5 U8.7-201ENST00000364940 136 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 SNORA9.2-201ENST00000365361 133 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 SNORA20B-201ENST00000384220 132 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 MIR526A2-201ENST00000390198 65 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 AC114982.1-201ENST00000469402 321 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 AC027419.1-201ENST00000522976 328 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 AC109810.1-201ENST00000534066 224 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 AC107016.2-201ENST00000547968 190 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 AC091544.4-201ENST00000555268 342 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 MIR4724-201ENST00000579485 89 ntBASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SNCAIPQ9Y6H5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNCAIPQ9Y6H5 MIR367-201ENST00000362299 68 ntBASIC3.39□□□□□ -1.87
SNCAIPQ9Y6H5 RNU6-234P-201ENST00000365229 104 ntBASIC3.39□□□□□ -1.87
SNCAIPQ9Y6H5 RNU6-144P-201ENST00000383951 107 ntBASIC3.39□□□□□ -1.87
SNCAIPQ9Y6H5 RNU6-959P-201ENST00000384671 107 ntBASIC3.39□□□□□ -1.87
SNCAIPQ9Y6H5 MIR518C-201ENST00000384822 101 ntBASIC3.39□□□□□ -1.87
SNCAIPQ9Y6H5 MIR616-201ENST00000385293 97 ntBASIC3.39□□□□□ -1.87
SNCAIPQ9Y6H5 MT-TT-201ENST00000387460 66 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms