Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MIR6075-201ENST00000620782 95 ntBASIC3.62□□□□□ -1.83
HRH3Q9Y5N1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HRH3Q9Y5N1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.62□□□□□ -1.83
HRH3Q9Y5N1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HRH3Q9Y5N1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 AP003122.5-201ENST00000527668 3766 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 MIR208A-201ENST00000362287 71 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 SNORA60-201ENST00000362396 134 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 MIR30B-201ENST00000384850 88 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 MIR802-201ENST00000390235 94 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 RNU2-32P-201ENST00000411193 191 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 AC009414.1-201ENST00000427200 443 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 AC009969.1-201ENST00000438726 172 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 AL161788.1-201ENST00000441805 169 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 RNU6-970P-201ENST00000516312 107 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 SNORA40.13-201ENST00000516379 120 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 AC022217.4-201ENST00000604389 163 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 MIR5739-201ENST00000619803 80 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 AC068647.1-201ENST00000489539 2265 ntBASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HRH3Q9Y5N1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 RNU6-743P-201ENST00000364151 106 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 SNORD73B-201ENST00000364394 72 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 Y_RNA.328-201ENST00000365208 113 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 SNORA70.4-201ENST00000365509 134 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 SNORA12.1-201ENST00000390873 148 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 EDDM3CP-201ENST00000415977 425 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 AC083863.1-201ENST00000438811 231 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 HMGN2P32-201ENST00000444648 269 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 AL133547.1-201ENST00000448546 220 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 NDUFA4P2-201ENST00000489989 244 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 RNA5SP281-201ENST00000516504 135 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 SCARNA14-201ENST00000516903 136 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 MIR5047-201ENST00000579212 100 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 AC087685.1-201ENST00000587507 141 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 AC007229.1-201ENST00000590455 412 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 AP001318.4-201ENST00000616637 121 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 MIR7157-201ENST00000635801 60 ntBASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HRH3Q9Y5N1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 U8.6-201ENST00000364939 135 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 Y_RNA.348-201ENST00000365403 103 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 RNU6-905P-201ENST00000384434 107 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 Y_RNA.544-201ENST00000384650 113 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 AL590004.2-201ENST00000404787 371 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 AC123900.1-201ENST00000420390 96 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 SNRPGP13-201ENST00000442212 177 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 CYP2C59P-201ENST00000457790 269 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 AP001486.1-201ENST00000463339 476 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 RN7SKP282-201ENST00000516824 299 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 RNU6-856P-201ENST00000516959 98 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 RNU6-711P-201ENST00000517255 106 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 MIR3186-201ENST00000577404 85 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 AC244205.2-202ENST00000635781 342 ntBASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HRH3Q9Y5N1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HRH3Q9Y5N1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.59□□□□□ -1.84
HRH3Q9Y5N1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HRH3Q9Y5N1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 AC091564.4-201ENST00000533934 2194 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 AC018630.2-201ENST00000534866 2403 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 SNORA63.5-201ENST00000363548 123 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 RNY4P6-201ENST00000363667 96 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.213-201ENST00000364178 111 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.366-201ENST00000365540 102 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 RNU6-1014P-201ENST00000383940 103 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.558-201ENST00000384685 113 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 U8.11-201ENST00000384699 133 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 MIR200C-201ENST00000384980 68 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 SNORA3C-201ENST00000408792 125 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms