Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
HDGFL3Q9Y3E1 MIR526A1-201ENST00000384897 85 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 MTCO2P11-201ENST00000431069 680 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC073415.1-201ENST00000449240 153 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AP000870.1-201ENST00000472927 406 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-58P-201ENST00000517143 103 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC023827.1-201ENST00000569247 97 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC008536.2-201ENST00000607284 349 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC017083.3-201ENST00000609955 700 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC103705.1-201ENST00000619013 241 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC079248.2-201ENST00000623779 326 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC005609.4-201ENST00000625071 447 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 AC005592.1-201ENST00000566527 1640 ntBASIC0.27□□□□□ -2.37
HDGFL3Q9Y3E1 RNU4-21P-201ENST00000362802 126 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-553P-201ENST00000364047 96 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 MIR562-201ENST00000384894 95 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 DAP3P1-201ENST00000441522 278 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 MTCO3P38-201ENST00000468910 766 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 MTND1P22-201ENST00000510572 951 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-189P-201ENST00000516120 101 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 RNU2-56P-201ENST00000516826 190 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-341P-201ENST00000516973 96 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 AC023157.2-201ENST00000540596 141 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 AC027288.2-201ENST00000553028 243 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 AL157687.1-201ENST00000554853 619 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 7SK.7-201ENST00000603504 247 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 AC016597.2-201ENST00000613256 341 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 AC122133.1-201ENST00000613964 233 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 AC007014.2-201ENST00000615581 479 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 MTND5P16-201ENST00000460269 1703 ntBASIC0.26□□□□□ -2.37
HDGFL3Q9Y3E1 FGF7P2-201ENST00000332473 296 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 Y_RNA.159-201ENST00000363674 87 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-996P-201ENST00000365438 107 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 MIR598-201ENST00000384868 97 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 RNA5SP482-201ENST00000391269 118 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-325P-201ENST00000411132 105 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 MTCO3P19-201ENST00000415864 321 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 HSFY5P-201ENST00000453726 309 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 AC010469.2-201ENST00000496412 480 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 AC097462.1-201ENST00000514125 324 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-232P-201ENST00000517144 64 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 AP001372.4-201ENST00000524889 472 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 AC091178.2-201ENST00000584401 117 ntBASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
HDGFL3Q9Y3E1 AL390237.1-201ENST00000404226 1415 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 MTND4P12-201ENST00000498999 1377 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 SNORA1B-201ENST00000362535 133 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-82P-201ENST00000363970 107 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 Y_RNA.336-201ENST00000365307 109 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 Y_RNA.415-201ENST00000384012 112 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 MIR1185-1-201ENST00000408598 86 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 MTCO2P18-201ENST00000457151 658 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 RNU7-63P-201ENST00000459054 62 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 AC010598.1-201ENST00000510378 103 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 SNORA25.14-201ENST00000516481 132 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 RNU6-1198P-201ENST00000516904 67 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 AP002004.2-201ENST00000531656 154 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 AL136317.1-201ENST00000612653 226 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
HDGFL3Q9Y3E1 AC134026.1-201ENST00000623249 2239 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 MIR103A2-201ENST00000362154 78 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 SNORD115-32-201ENST00000364079 82 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 RNY1-201ENST00000364228 113 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 MIR521-1-201ENST00000384902 87 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AL606923.1-201ENST00000406616 190 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 MRPS18CP6-201ENST00000423587 223 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AL359672.1-201ENST00000442302 409 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 MTND4P18-201ENST00000447010 465 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 RNU7-125P-201ENST00000458760 62 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 HMGN2P26-201ENST00000463169 339 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AC091021.1-201ENST00000468051 388 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AC092436.3-201ENST00000511788 257 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 SNORA68.3-201ENST00000515906 83 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 RNU7-172P-201ENST00000517125 64 ntBASIC0.23□□□□□ -2.37
HDGFL3Q9Y3E1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms