Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MIR32-201ENST00000384965 70 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AL606489.2-201ENST00000433886 234 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 FABP5P4-201ENST00000437203 171 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 MTCO2P7-201ENST00000446518 666 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC079354.2-201ENST00000453523 154 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC233266.1-201ENST00000454518 96 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 LINC01399-202ENST00000458450 244 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC010469.2-201ENST00000496412 480 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 MTCO1P29-201ENST00000496868 288 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 SNORA19.2-201ENST00000516013 114 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 SNORA70.12-201ENST00000516084 153 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC016957.1-201ENST00000534895 309 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 MIR3192-201ENST00000584920 77 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC009229.3-201ENST00000608056 282 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC109347.2-201ENST00000610220 349 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AC242852.1-201ENST00000612151 96 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 AL158209.2-201ENST00000619266 216 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.35
HHLA3Q9XRX5 Y_RNA.167-201ENST00000363735 109 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 RNU4-20P-201ENST00000365601 151 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 RNU6-1103P-201ENST00000384150 107 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 RNU6-348P-201ENST00000384386 107 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 MIR526A1-201ENST00000384897 85 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AL590002.1-201ENST00000406554 418 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 MTND4P18-201ENST00000447010 465 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AC091179.3-201ENST00000474761 144 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 SNORD111.1-201ENST00000516421 86 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AC027288.2-201ENST00000553028 243 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 MIR4528-201ENST00000577763 90 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AC012557.2-201ENST00000605919 418 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 AL133215.3-201ENST00000609801 448 ntBASIC0.34□□□□□ -2.36
HHLA3Q9XRX5 Y_RNA.238-201ENST00000364441 102 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 RNU4-66P-201ENST00000365199 138 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 RNU6-214P-201ENST00000384130 107 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 MIR10B-201ENST00000385011 110 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 SNORD99-201ENST00000408612 74 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC073464.1-201ENST00000429823 534 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC092628.1-201ENST00000436250 252 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC091021.1-201ENST00000468051 388 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC107401.1-201ENST00000503426 685 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 RNU6-415P-201ENST00000516252 97 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 SNORA40.12-201ENST00000516329 111 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 RNU6-229P-201ENST00000516614 102 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 RNU6-1332P-201ENST00000516666 104 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC022868.1-201ENST00000517767 391 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC100830.2-201ENST00000581636 240 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC091178.2-201ENST00000584401 117 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC093424.1-201ENST00000604999 338 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC024933.1-201ENST00000608472 348 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 FAM157A-202ENST00000615155 405 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 MIR6734-201ENST00000621166 68 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 AC091931.1-201ENST00000623488 728 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 ELL2P3-201ENST00000457883 1602 ntBASIC0.33□□□□□ -2.36
HHLA3Q9XRX5 SNORA1B-201ENST00000362535 133 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 SNORD113-7-201ENST00000363762 77 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 SNORD115-32-201ENST00000364079 82 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 Y_RNA.319-201ENST00000365138 92 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 RNU6-945P-201ENST00000383947 107 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 RNU6-42P-201ENST00000384165 107 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 RNU6-933P-201ENST00000384424 107 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 MIR1287-201ENST00000408492 90 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 RNA5SP247-201ENST00000411181 105 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC244023.1-201ENST00000426884 112 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AL162725.1-201ENST00000435405 301 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 RNU7-187P-201ENST00000458985 68 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 Y_RNA.654-201ENST00000497848 106 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC097462.1-201ENST00000514125 324 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 RNA5SP401-201ENST00000515920 127 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 RN7SKP287-201ENST00000516546 266 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 RNU6-1116P-201ENST00000517269 99 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC091144.1-201ENST00000519573 138 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC023827.1-201ENST00000569247 97 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC131055.1-201ENST00000584626 316 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC242498.1-201ENST00000604134 111 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC092807.2-201ENST00000609367 243 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC243994.1-201ENST00000618627 109 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC006504.8-201ENST00000621046 635 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AC006435.5-201ENST00000624486 112 ntBASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
HHLA3Q9XRX5 AL442644.1-201ENST00000454390 3105 ntBASIC0.31□□□□□ -2.36
HHLA3Q9XRX5 RNA5SP264-201ENST00000363115 107 ntBASIC0.31□□□□□ -2.36
HHLA3Q9XRX5 Y_RNA.169-201ENST00000363745 96 ntBASIC0.31□□□□□ -2.36
HHLA3Q9XRX5 Y_RNA.267-201ENST00000364679 109 ntBASIC0.31□□□□□ -2.36
HHLA3Q9XRX5 RNU4-9P-201ENST00000364951 139 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms