Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FTH1P15-201ENST00000406984 280 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 AL365496.1-201ENST00000426885 215 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 RPL23AP82-202ENST00000427528 469 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 RPL23AP7-203ENST00000449021 469 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 CENPBD1P1-201ENST00000464061 469 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 RPL36AP21-201ENST00000490372 323 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 RNY4P20-201ENST00000516678 93 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 MIR3129-201ENST00000581095 76 ntBASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDZRN3Q9UPQ7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-600P-201ENST00000362524 99 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 MIR548D2-201ENST00000384955 97 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 SNORA26-201ENST00000391286 122 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 AL138878.1-201ENST00000405131 347 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 AC096949.1-201ENST00000412047 152 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 AC006989.1-201ENST00000427212 131 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 AL049873.1-201ENST00000480540 376 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 AP004371.1-201ENST00000525240 214 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 AC005972.2-201ENST00000604690 348 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 AC002064.3-201ENST00000623448 346 ntBASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDZRN3Q9UPQ7 AC118273.1-201ENST00000525324 3006 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-1099P-201ENST00000363533 107 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 SNORD115-35-201ENST00000365122 82 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 SNORA67.2-201ENST00000384300 149 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 RPL39P25-201ENST00000449384 154 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-240P-201ENST00000516098 97 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-1149P-201ENST00000516810 97 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 MIR4325-201ENST00000583049 90 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 AC012531.4-201ENST00000616509 177 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 AP003355.3-201ENST00000623465 114 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 AC018692.3-201ENST00000623929 123 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 AC006160.2-201ENST00000637708 154 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 AC017071.1-201ENST00000564407 2204 ntBASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PDZRN3Q9UPQ7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 AC004925.1-201ENST00000624256 2706 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 Y_RNA.94-201ENST00000363068 106 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 U3.8-201ENST00000363675 217 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 Y_RNA.190-201ENST00000363964 101 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 MIR759-201ENST00000390224 91 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 BTF3P4-201ENST00000418852 495 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 AC004941.2-201ENST00000427009 228 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 NDUFB9P3-201ENST00000521269 501 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 MIR6134-201ENST00000617606 109 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 SNORD98-201ENST00000636377 67 ntBASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.48□□□□□ -1.69
PDZRN3Q9UPQ7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 RNU4-35P-201ENST00000362588 141 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-486P-201ENST00000363116 107 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-1229P-201ENST00000364295 107 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-590P-201ENST00000365039 107 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 SNORD38C-201ENST00000384381 69 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 Y_RNA.486-201ENST00000384398 107 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 MIR873-201ENST00000401120 77 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 AC125238.1-201ENST00000448842 249 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 RNU6-795P-201ENST00000516323 103 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 SCARNA15-202ENST00000516881 127 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 RNA5SP291-201ENST00000517222 105 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 AC105137.2-201ENST00000569073 466 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 TCL6_2.1-201ENST00000615162 119 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 U7.8-201ENST00000619968 63 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 AC022149.2-201ENST00000621061 203 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 AL159152.1-201ENST00000635019 2587 ntBASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDZRN3Q9UPQ7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 RNA5SP295-201ENST00000362655 121 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-1292P-201ENST00000383856 107 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 Y_RNA.500-201ENST00000384466 111 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 MIR548B-201ENST00000385247 97 ntBASIC4.46□□□□□ -1.7
PDZRN3Q9UPQ7 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms