Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6-271P-201ENST00000363858 105 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 Y_RNA.357-201ENST00000365487 109 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-449P-201ENST00000383914 107 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 SNORD116-18-201ENST00000383961 92 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 Y_RNA.572-201ENST00000384757 98 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 MIR218-1-201ENST00000384999 110 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-239P-201ENST00000390990 99 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AL606753.1-201ENST00000427435 87 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AL353705.1-201ENST00000433468 480 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AC016717.1-201ENST00000448918 286 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-498P-201ENST00000459468 107 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 RN7SL594P-201ENST00000470590 287 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 RNU7-115P-201ENST00000516433 55 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 RNU6-1337P-201ENST00000516525 95 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AC025647.1-201ENST00000517879 253 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 MIR4431-201ENST00000579990 94 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AL391903.3-201ENST00000612158 163 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 MIR5739-201ENST00000619803 80 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 AC022149.2-201ENST00000621061 203 ntBASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDC42EP3Q9UKI2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 Y_RNA.24-201ENST00000362508 103 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 U8.7-201ENST00000364940 136 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 Y_RNA.400-201ENST00000383963 111 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 RNU6-1323P-201ENST00000384025 107 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 SNORD14D-201ENST00000384390 87 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 RN7SKP123-201ENST00000410732 291 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 RNU6-57P-201ENST00000411348 103 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 CR769767.1-201ENST00000436337 346 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 HMGN2P18-201ENST00000450680 270 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC021205.2-201ENST00000480069 347 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 RNU2-34P-201ENST00000516534 121 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 SNORA64.4-201ENST00000516632 81 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC022616.8-201ENST00000533569 253 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 MIR3199-1-201ENST00000582434 88 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 RPL12P50-201ENST00000603116 116 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AP003357.1-201ENST00000604497 148 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AP001485.1-201ENST00000604799 199 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC004832.5-201ENST00000608677 401 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC090115.4-201ENST00000609970 188 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AL137790.1-201ENST00000634283 177 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 AC008264.2-201ENST00000610193 3731 ntBASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.77□□□□□ -1.97
CDC42EP3Q9UKI2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 RNU6-969P-201ENST00000383900 105 ntBASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 AL161788.1-201ENST00000441805 169 ntBASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 RNU6-453P-201ENST00000516819 85 ntBASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 AL356280.1-201ENST00000603614 379 ntBASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 MIR548AY-201ENST00000617669 107 ntBASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.76□□□□□ -1.97
CDC42EP3Q9UKI2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 RNA5SP126-201ENST00000365092 109 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 RNU6-546P-201ENST00000383991 107 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 SNORD116-13-201ENST00000384408 92 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 RNU2-48P-201ENST00000410694 191 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 AC016909.1-201ENST00000415916 166 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 MTCO1P44-201ENST00000441935 243 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 AL357552.1-201ENST00000445254 415 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 AC010531.2-201ENST00000465012 153 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 RNA5SP20-201ENST00000515976 84 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 SNORA48.11-201ENST00000517015 89 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 AC109810.1-201ENST00000534066 224 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 AC012640.5-201ENST00000623897 319 ntBASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CDC42EP3Q9UKI2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDC42EP3Q9UKI2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CDC42EP3Q9UKI2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CDC42EP3Q9UKI2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDC42EP3Q9UKI2 RNU6-117P-201ENST00000365415 107 ntBASIC2.74□□□□□ -1.97
CDC42EP3Q9UKI2 RNU6-418P-201ENST00000384035 107 ntBASIC2.74□□□□□ -1.97
CDC42EP3Q9UKI2 FO393413.1-201ENST00000402892 195 ntBASIC2.74□□□□□ -1.97
CDC42EP3Q9UKI2 RNU2-32P-201ENST00000411193 191 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms